hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13424081/chunk_1/iprscan-20080502-13424081.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0810
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07738.3.ls Sad1 / UNC-like C-terminal                     264.5    1.9e-76   1
PF07738.3.fs Sad1 / UNC-like C-terminal                     262.6    7.5e-76   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07738.3.fs   1/1     687   822 ..     1   147 []   262.6  7.5e-76
PF07738.3.ls   1/1     687   822 ..     1   147 []   264.5  1.9e-76

Alignments of top-scoring domains:
PF07738.3.fs: domain 1 of 1, from 687 to 822: score 262.6, E = 7.5e-76
                   *->lnyeaksprvilqedkDkympgpCwsfkgsrGfvvieLsepIiveav
                      l+y+++sprv++q+d     pg+Cw+fkgs+G++v++Ls++I++ a+
    KIAA0810   687    LWYFSQSPRVVIQPD---IYPGNCWAFKGSQGYLVVRLSMMIHPAAF 730  

                   tLeHveksvspdGnfsSAPKdFeVsgserypdeesTeewvlLGeFtYdld
                   tLeH++k++sp+Gn+sSAPKdF+V+g+e++ +ee     +lLG+FtYd+d
    KIAA0810   731 TLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEE----GQLLGQFTYDQD 776  

                   gknlQtFqlqnpCpyiekqswvkyVklrilSNyGnehYTClYrfRVhGts
                   g++lQ+Fq   + p+++   ++++V+lri+SN+G+++YTClYrfRVhG++
    KIAA0810   777 GESLQMFQALKR-PDDT---AFQIVELRIFSNWGHPEYTCLYRFRVHGEP 822  

                   <-*
                      
    KIAA0810     -     -    

PF07738.3.ls: domain 1 of 1, from 687 to 822: score 264.5, E = 1.9e-76
                   *->lnyeaksprvilqedkDkympgpCwsfkgsrGfvvieLsepIiveav
                      l+y+++sprv++q+d     pg+Cw+fkgs+G++v++Ls++I++ a+
    KIAA0810   687    LWYFSQSPRVVIQPD---IYPGNCWAFKGSQGYLVVRLSMMIHPAAF 730  

                   tLeHveksvspdGnfsSAPKdFeVsgserypdeesTeewvlLGeFtYdld
                   tLeH++k++sp+Gn+sSAPKdF+V+g+e++ +ee     +lLG+FtYd+d
    KIAA0810   731 TLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEE----GQLLGQFTYDQD 776  

                   gknlQtFqlqnpCpyiekqswvkyVklrilSNyGnehYTClYrfRVhGts
                   g++lQ+Fq   + p+++   ++++V+lri+SN+G+++YTClYrfRVhG++
    KIAA0810   777 GESLQMFQALKR-PDDT---AFQIVELRIFSNWGHPEYTCLYRFRVHGEP 822  

                   <-*
                      
    KIAA0810     -     -    

//