HUGE

Gene/Protein Characteristic Table for KIAA0826

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05235
Accession No. :	AB020633
Description :	Protein furry homolog-like.
HUGO Gene Name :
Clone Name :	hh03638 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 5770 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 2059 bp

Genome contig ID gi89161207r_48094137
PolyA signal sequence
(AATAAA,-24)
+----*----+----*----+----*----+----
TCTATTAATATAATAAAAATGAATATACCTGCAGC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAGCAAGATGCAAACAAATTCATTAGGATGGCCTTCTGCAACAGCATTTT

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 4 r 48194137 48241626 21 99.8 Perfect prediction

Features of the protein sequence	Description

Length: 1236 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAG54477	100.0	unnamed protein...	Homo sapiens
EAW93066	100.0	hCG1755809, iso...	Homo sapiens
O94915	100.0	Protein furry h...	Homo sapiens
XP_001917163	96.8	FRY-like [Equus...	Equus caballus
XP_588315	95.5	similar to furr...	Bos taurus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: AAACTTTTGGGTGTGGGGCAG

Primer_r
: ACAACACAAACCAACAGCTAC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 4

Experimental conditions

Panel name	: UniGene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	2059 bp
Genome contig ID	gi89161207r_48094137
PolyA signal sequence (AATAAA,-24)	+--------+--------+----*----+---- TCTATTAATATAATAAAAATGAATATACCTGCAGC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAGCAAGATGCAAACAAATTCATTAGGATGGCCTTCTGCAACAGCATTTT

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	4	r	48194137	48241626	21	99.8	Perfect prediction

Primer_f	: AAACTTTTGGGTGTGGGGCAG
Primer_r	: ACAACACAAACCAACAGCTAC
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA0826

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information