hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14280743/chunk_1/iprscan-20080502-14280743.nocrc
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Query sequence: KIAA0836
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF06662.3.ls D-glucuronyl C5-epimerase C-terminus          462.0   6.9e-136   1
PF06662.3.fs D-glucuronyl C5-epimerase C-terminus          460.1   2.5e-135   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF06662.3.fs   1/1     408   599 ..     1   206 []   460.1 2.5e-135
PF06662.3.ls   1/1     408   599 ..     1   206 []   462.0 6.9e-136

Alignments of top-scoring domains:
PF06662.3.fs: domain 1 of 1, from 408 to 599: score 460.1, E = 2.5e-135
                   *->qdekrGGWrvpverplkegyknLspGWysAmaQGhgisvLaRAYelt
                      qdek GGW+++v+r+l+eg+k+L+pGWysAmaQG++is+L+RAY lt
    KIAA0836   408    QDEK-GGWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLT 453  

                   GGDEeYLksAakAinlfkvpsekGGVkatfmgKnKSYyWYeEYpttppsy
                   + D+++L+sA +A++++k++se++GVka+fm+K+   +WYeEYpttp+s+
    KIAA0836   454 K-DHIFLNSALRATAPYKFLSEQHGVKAVFMNKH---DWYEEYPTTPSSF 499  

                   VLNGFiysllGLYDlsqLeLmiDenktTgnarikeAleLykeGlkSLKam
                   VLNGF+ysl+GLYDl         ++t+g++++keA++Ly++G++SLKam
    KIAA0836   500 VLNGFMYSLIGLYDL---------KETAGEKLGKEARSLYERGMESLKAM 540  

                   LplYDTGsWTyYDlrHlaLGvApNLArwdYHalHvnlLllLytitgDeiy
                   LplYDTGs+T+YDlrH++LG+ApNLArwdYH++H+n+L+lL+ti++++i+
    KIAA0836   541 LPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPIF 590  

                   kktaeRWks<-*
                   k++++RWks   
    KIAA0836   591 KEFVKRWKS    599  

PF06662.3.ls: domain 1 of 1, from 408 to 599: score 462.0, E = 6.9e-136
                   *->qdekrGGWrvpverplkegyknLspGWysAmaQGhgisvLaRAYelt
                      qdek GGW+++v+r+l+eg+k+L+pGWysAmaQG++is+L+RAY lt
    KIAA0836   408    QDEK-GGWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLT 453  

                   GGDEeYLksAakAinlfkvpsekGGVkatfmgKnKSYyWYeEYpttppsy
                   + D+++L+sA +A++++k++se++GVka+fm+K+   +WYeEYpttp+s+
    KIAA0836   454 K-DHIFLNSALRATAPYKFLSEQHGVKAVFMNKH---DWYEEYPTTPSSF 499  

                   VLNGFiysllGLYDlsqLeLmiDenktTgnarikeAleLykeGlkSLKam
                   VLNGF+ysl+GLYDl         ++t+g++++keA++Ly++G++SLKam
    KIAA0836   500 VLNGFMYSLIGLYDL---------KETAGEKLGKEARSLYERGMESLKAM 540  

                   LplYDTGsWTyYDlrHlaLGvApNLArwdYHalHvnlLllLytitgDeiy
                   LplYDTGs+T+YDlrH++LG+ApNLArwdYH++H+n+L+lL+ti++++i+
    KIAA0836   541 LPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPIF 590  

                   kktaeRWks<-*
                   k++++RWks   
    KIAA0836   591 KEFVKRWKS    599  

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