hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14512888/chunk_1/iprscan-20080502-14512888.nocrc
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Query sequence: KIAA0850
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00612                                                 314.5    7.6e-90   6
SM00225                                                  99.6    3.6e-25   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00225      1/1      34   131 ..     1   114 []    99.6  3.6e-25
SM00612      1/6     371   417 ..     1    55 []    64.2  1.6e-14
SM00612      2/6     418   465 ..     1    55 []    54.9    1e-11
SM00612      3/6     466   514 ..     1    55 []    43.4  3.1e-08
SM00612      4/6     515   561 ..     1    55 []    68.1  1.1e-15
SM00612      5/6     562   608 ..     1    55 []    65.3  7.8e-15
SM00612      6/6     609   643 ..     1    55 []    18.5     0.17

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 34 to 131: score 99.6, E = 3.6e-25
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      cDv+l+v g         ++  a  H+avLa+c   Spy+ ++f+s+
    KIAA0850    34    CDVRLQVCG---------HEMLA--HRAVLACC---SPYLFEIFNSd 66   

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                   +++++ +++ +dD       +pea++ lLn+ Yt +l  ++e    v+++
    KIAA0850    67 sdphgishVKFDD------LNPEAVEVLLNYAYTaQLKADKE---LVKDV 107  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                     +A++l    ++++++++C ++ll++    
    KIAA0850   108 YSAAKKL----KMDrVKQVCGDYLLSRM    131  

SM00612: domain 1 of 6, from 371 to 417: score 64.2, E = 1.6e-14
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      k++++GG+++         ++l++vE+Y+p+t+ W+ +++M+tpR++
    KIAA0850   371    KLIAAGGYNR--------EECLRTVECYNPHTDHWSFLAPMRTPRAR 409  

                   agvaving<-*
                   + +av+ g   
    KIAA0850   410 FQMAVLMG    417  

SM00612: domain 2 of 6, from 418 to 465: score 54.9, E = 1e-11
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      ++YvvGG +g+       ++ l+  E+YD   + W pvp ++t R++
    KIAA0850   418    QLYVVGGSNGH-------SDDLSCGEMYDSNIDDWIPVPELRTNRCN 457  

                   agvaving<-*
                   agv+++ng   
    KIAA0850   458 AGVCALNG    465  

SM00612: domain 3 of 6, from 466 to 514: score 43.4, E = 3.1e-08
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      k+Y+vGG d+       ++  lk+ +v+Dp t+ W+++++++ +R  
    KIAA0850   466    KLYIVGGSDP------YGQKGLKNCDVFDPVTKLWTSCAPLNIRRHQ 506  

                   agvaving<-*
                   ++v+ ++g   
    KIAA0850   507 SAVCELGG    514  

SM00612: domain 4 of 6, from 515 to 561: score 68.1, E = 1.1e-15
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                       +Y++GG           +++l++vE+Y+pe+n+W+ +++M+++R g
    KIAA0850   515    YLYIIGGAES--------WNCLNTVERYNPENNTWTLIAPMNVARRG 553  

                   agvaving<-*
                   agvav+ng   
    KIAA0850   554 AGVAVLNG    561  

SM00612: domain 5 of 6, from 562 to 608: score 65.3, E = 7.8e-15
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      k++v+GGfdg        +++ + vE+YDp +n+W+++ +M++pRs+
    KIAA0850   562    KLFVCGGFDG--------SHAISCVEMYDPTRNEWKMMGNMTSPRSN 600  

                   agvaving<-*
                   ag+a++++   
    KIAA0850   601 AGIATVGN    608  

SM00612: domain 6 of 6, from 609 to 643: score 18.5, E = 0.17
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                       iY+vGGfdg        +++l++vEvY++e+n+W+p ++  +    
    KIAA0850   609    TIYAVGGFDG--------NEFLNTVEVYNLESNEWSPYTKIFQ---- 643  

                   agvaving<-*
                              
    KIAA0850     - --------    -    

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