HUGE

Gene/Protein Characteristic Table for KIAA0884

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05272
Accession No. :	AB020691
Description :	GTPase-activating Rap/Ran-GAP domain-like 1.
HUGO Gene Name :	GTPase activating Rap/RanGAP domain-like 1 (GARNL1)
Clone Name :	hk07674 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 4487 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO
Ensembl ContigView (Add our DAS server as a DAS source)
Content-type: text/html ¥¨¥é¡¼¡ª

hk07674 ¤Î¾ðÊó¤¬¥Ç¡¼¥¿¥Ù¡¼¥¹¤Ë¤¢¤ê¤Þ¤»¤ó¤Ç¤·¤¿¡£

¤â¤É¤ë

Features of the protein sequence	Description

Length: 943 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
EAW65871	99.9	GTPase activati...	Homo sapiens
EAW65870	98.1	GTPase activati...	Homo sapiens
EAW65869	98.1	GTPase activati...	Homo sapiens
AAI45120	91.3	Unknown (protei...	Mus musculus
EAW65868	93.1	GTPase activati...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: CTCAGATAGTCATTCGGATTC

Primer_r
: CACATCAGCAGAGGACGTAAC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 14

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: CTCAGATAGTCATTCGGATTC
Primer_r	: CACATCAGCAGAGGACGTAAC
PCR product length	: 106 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for KIAA0884

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information