hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16465283/chunk_1/iprscan-20080502-16465283.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0918
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                 172.2    5.2e-47  10
SM00082                                                  62.3    6.3e-14   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/10    116   135 ..     1    24 []     0.9  3.2e+02
SM00369     2/10    136   159 ..     1    24 []    24.1    0.019
SM00369     3/10    160   183 ..     1    24 []    20.1      0.3
SM00369     4/10    184   207 ..     1    24 []    20.5     0.24
SM00369     5/10    210   231 ..     1    24 []     5.6       87
SM00082     1/2     243   293 ..     1    55 []    33.5    3e-05
SM00369     6/10    441   463 ..     1    24 []    11.4       17
SM00369     7/10    464   487 ..     1    24 []    33.3  3.3e-05
SM00369     8/10    488   511 ..     1    24 []    25.8   0.0059
SM00369     9/10    512   535 ..     1    24 []    27.3   0.0021
SM00369    10/10    536   559 ..     1    24 []     3.2  1.7e+02
SM00082     2/2     571   621 ..     1    55 []    28.8  0.00074

Alignments of top-scoring domains:
SM00369: domain 1 of 10, from 116 to 135: score 0.9, E = 3.2e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                            L+L++N ++ +  gaF+g   
    KIAA0918   116    ----SILHLGSNVIQDIETGAFHG    135  

SM00369: domain 2 of 10, from 136 to 159: score 24.1, E = 0.019
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+ Lr+L+L+nN+L+ L +++F g   
    KIAA0918   136    LRGLRRLHLNNNKLELLRDDTFLG    159  

SM00369: domain 3 of 10, from 160 to 183: score 20.1, E = 0.3
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL+ L  ++N ++ + p+aF+    
    KIAA0918   160    LENLEYLQVDYNYISVIEPNAFGK    183  

SM00369: domain 4 of 10, from 184 to 207: score 20.5, E = 0.24
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+ L++L L++N L+sLP+++F+    
    KIAA0918   184    LHLLQVLILNDNLLSSLPNNLFRF    207  

SM00369: domain 5 of 10, from 210 to 231: score 5.6, E = 87
                   *->LpnLreLdLsnNqLtsLP.pgaFqg<-*
                         L++LdL +N+L+ LP  g++q+   
    KIAA0918   210    ---LTHLDLRGNRLKLLPyVGLLQH    231  

SM00082: domain 1 of 2, from 243 to 293: score 33.5, E = 3e-05
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll
                      NP+nC+CeL  L++wl+    ++    + +++C++P +l+G + l+ 
    KIAA0918   243    NPWNCSCELISLKDWLDS--ISYSALVG-DVVCETPFRLHG-RDLDE 285  

                   lpsefsCp<-*
                   + +   Cp   
    KIAA0918   286 VSKQELCP    293  

SM00369: domain 6 of 10, from 441 to 463: score 11.4, E = 17
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       + L  L+L+nN+++ + ++aF++   
    KIAA0918   441    -TGLDLLHLGNNRISMIQDRAFGD    463  

SM00369: domain 7 of 10, from 464 to 487: score 33.3, E = 3.3e-05
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+nLr+L+L++N++++L p++F g   
    KIAA0918   464    LTNLRRLYLNGNRIERLSPELFYG    487  

SM00369: domain 8 of 10, from 488 to 511: score 25.8, E = 0.0059
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L +L+ L L++N ++++ +g+F++   
    KIAA0918   488    LQSLQYLFLQYNLIREIQSGTFDP    511  

SM00369: domain 9 of 10, from 512 to 535: score 27.3, E = 0.0021
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       pnL+ L L+nN L++ P+g+F+g   
    KIAA0918   512    VPNLQLLFLNNNLLQAMPSGVFSG    535  

SM00369: domain 10 of 10, from 536 to 559: score 3.2, E = 1.7e+02
                   *->LpnLreLdLsnNqLtsLP.pgaFqg<-*
                      L+ Lr L+L +N++tsLP +g+++    
    KIAA0918   536    LTLLR-LNLRSNHFTSLPvSGVLDQ    559  

SM00082: domain 2 of 2, from 571 to 621: score 28.8, E = 0.00074
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll
                      NP++C+C++  +++w+e+++  +l d   ++ C  P++++ + +++ 
    KIAA0918   571    NPWDCTCDIVGMKLWVEQLKVGVLVD---EVICKAPKKFAETDMRSI 614  

                   lpsefsCp<-*
                      e  Cp   
    KIAA0918   615 KS-ELLCP    621  

//