hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17001541/chunk_1/iprscan-20080502-17001541.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0926
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00368                                                 134.0    1.6e-35   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00368    1/5     825   852 ..     1    28 []    26.9   0.0028
SM00368    2/5     854   881 ..     1    28 []    19.5     0.47
SM00368    3/5     882   909 ..     1    28 []    32.0  7.9e-05
SM00368    4/5     911   938 ..     1    28 []    15.9      1.5
SM00368    5/5     939   966 ..     1    28 []    39.6  4.2e-07

Alignments of top-scoring domains:
SM00368: domain 1 of 5, from 825 to 852: score 26.9, E = 0.0028
                   *->npsLreLdLsnNklgdeGaraLaeaLks<-*
                      +++L+eLdLs+N l  + ++ L+++L+    
    KIAA0926   825    TRNLKELDLSGNSLSHSAVKSLCKTLRR    852  

SM00368: domain 2 of 5, from 854 to 881: score 19.5, E = 0.47
                   *->npsLreLdLsnNklgdeGaraLaeaLks<-*
                       + L++L+L++++l++e ++ La +L++   
    KIAA0926   854    RCLLETLRLAGCGLTAEDCKDLAFGLRA    881  

SM00368: domain 3 of 5, from 882 to 909: score 32.0, E = 7.9e-05
                   *->npsLreLdLsnNklgdeGaraLaeaLks<-*
                      n++L eLdLs N l+d+Ga++L++ L++   
    KIAA0926   882    NQTLTELDLSFNVLTDAGAKHLCQRLRQ    909  

SM00368: domain 4 of 5, from 911 to 938: score 15.9, E = 1.5
                   *->npsLreLdLsnNklgdeGaraLaeaLks<-*
                      +++L++L+L +++l+ + ++ La++L++   
    KIAA0926   911    SCKLQRLQLVSCGLTSDCCQDLASVLSA    938  

SM00368: domain 5 of 5, from 939 to 966: score 39.6, E = 4.2e-07
                   *->npsLreLdLsnNklgdeGaraLaeaLks<-*
                      +psL+eLdL++N+l d G+r L+e+L++   
    KIAA0926   939    SPSLKELDLQQNNLDDVGVRLLCEGLRH    966  

//