# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh04956.fasta.nr -Q ../query/KIAA0941.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0941, 533 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825447 sequences Expectation_n fit: rho(ln(x))= 5.3574+/-0.000187; mu= 10.6650+/- 0.010 mean_var=75.9665+/-14.540, 0's: 36 Z-trim: 54 B-trim: 2 in 1/65 Lambda= 0.147151 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|67472131|sp|Q7L804.1|RFIP2_HUMAN RecName: Full= ( 512) 3363 723.5 3.5e-206 gi|114632976|ref|XP_001152274.1| PREDICTED: RAB11 ( 512) 3354 721.6 1.3e-205 gi|73998902|ref|XP_535026.2| PREDICTED: similar to ( 615) 3232 695.7 9.5e-198 gi|149689648|ref|XP_001494294.1| PREDICTED: simila ( 512) 3219 692.9 5.5e-197 gi|149040527|gb|EDL94565.1| RAB11 family interacti ( 512) 3194 687.6 2.2e-195 gi|194042110|ref|XP_001927936.1| PREDICTED: simila ( 512) 3190 686.7 4e-195 gi|148669882|gb|EDL01829.1| RAB11 family interacti ( 512) 3180 684.6 1.7e-194 gi|76655248|ref|XP_612748.2| PREDICTED: RAB11 fami ( 511) 3150 678.3 1.4e-192 gi|74191964|dbj|BAE32923.1| unnamed protein produc ( 529) 3132 674.4 2.1e-191 gi|67106797|gb|AAY67796.1| RAB11-FIP2 long isoform ( 532) 2774 598.4 1.6e-168 gi|114632974|ref|XP_001152212.1| PREDICTED: RAB11 ( 532) 2765 596.5 5.9e-168 gi|57242913|gb|AAH89010.1| Rab11fip2 protein [Mus ( 386) 2362 510.9 2.6e-142 gi|149040528|gb|EDL94566.1| RAB11 family interacti ( 370) 2277 492.8 6.8e-137 gi|148669881|gb|EDL01828.1| RAB11 family interacti ( 370) 2259 489.0 9.6e-136 gi|154757481|gb|AAI51811.1| RAB11FIP2 protein [Bos ( 353) 2140 463.7 3.7e-128 gi|109090720|ref|XP_001100265.1| PREDICTED: RAB11 ( 452) 2076 450.2 5.6e-124 gi|60648907|gb|AAH91712.1| MGC84975 protein [Xenop ( 518) 1737 378.3 2.9e-102 gi|157423246|gb|AAI53349.1| LOC100127577 protein [ ( 518) 1706 371.7 2.7e-100 gi|125832811|ref|XP_001342460.1| PREDICTED: simila ( 478) 1090 240.9 6e-61 gi|47937658|gb|AAH72241.1| LOC432290 protein [Xeno ( 616) 918 204.5 7.2e-50 gi|89273343|emb|CAJ81459.1| novel protein similar ( 996) 918 204.6 1.1e-49 gi|134023869|gb|AAI35581.1| Rab11fip1 protein [Xen ( 601) 915 203.8 1.1e-49 gi|63101551|gb|AAH94487.1| LOC432290 protein [Xeno ( 607) 914 203.6 1.3e-49 gi|119583753|gb|EAW63349.1| RAB11 family interacti ( 648) 860 192.2 3.8e-46 gi|50603589|gb|AAH77720.1| RAB11 family interactin ( 649) 860 192.2 3.8e-46 gi|78459239|gb|ABB43161.1| RAB11-family interactin ( 649) 860 192.2 3.8e-46 gi|149541453|ref|XP_001519944.1| PREDICTED: simila (1348) 862 192.8 5.1e-46 gi|50659104|ref|NP_001002814.1| RAB11 family inter (1283) 860 192.4 6.5e-46 gi|33439255|gb|AAQ18786.1| Rab11-family interactin (1283) 860 192.4 6.5e-46 gi|67472130|sp|Q6WKZ4.2|RFIP1_HUMAN RecName: Full= (1283) 860 192.4 6.5e-46 gi|20068811|gb|AAM09571.1|AF368294_1 Rab-coupling ( 649) 854 190.9 9.2e-46 gi|109086159|ref|XP_001089664.1| PREDICTED: simila (1275) 848 189.8 3.8e-45 gi|79151763|gb|AAI08065.1| Zgc:122989 [Danio rerio ( 484) 839 187.6 6.7e-45 gi|97181130|sp|Q3B7T9.1|RFIP1_RAT RecName: Full=Ra ( 648) 839 187.7 8.4e-45 gi|62203552|gb|AAH93155.1| Zgc:122989 protein [Dan ( 471) 836 187.0 1e-44 gi|73979205|ref|XP_857501.1| PREDICTED: similar to ( 649) 836 187.1 1.3e-44 gi|73979203|ref|XP_539967.2| PREDICTED: similar to (1273) 836 187.3 2.2e-44 gi|67472138|sp|Q9D620.1|RFIP1_MOUSE RecName: Full= ( 645) 830 185.8 3.1e-44 gi|194226439|ref|XP_001915472.1| PREDICTED: RAB11 ( 650) 828 185.4 4.2e-44 gi|116138490|gb|AAI25401.1| Rab11fip1 protein [Mus ( 645) 827 185.2 4.9e-44 gi|124249097|ref|NP_001074282.1| RAB11 family inte (1166) 827 185.3 7.8e-44 gi|74181553|dbj|BAE30042.1| unnamed protein produc ( 645) 821 183.9 1.2e-43 gi|194679234|ref|XP_597040.3| PREDICTED: similar t ( 644) 816 182.8 2.5e-43 gi|126304077|ref|XP_001381852.1| PREDICTED: simila (1290) 796 178.8 8.1e-42 gi|34785442|gb|AAH57524.1| LOC402861 protein [Dani ( 651) 785 176.3 2.4e-41 gi|60416098|gb|AAH90684.1| LOC402861 protein [Dani ( 472) 782 175.5 2.9e-41 gi|118101354|ref|XP_001233961.1| PREDICTED: hypoth ( 623) 772 173.5 1.6e-40 gi|149634642|ref|XP_001514372.1| PREDICTED: hypoth ( 317) 735 165.4 2.1e-38 gi|47123092|gb|AAH70758.1| MGC83776 protein [Xenop ( 629) 718 162.0 4.4e-37 gi|117558545|gb|AAI27283.1| Rab11fip5 protein [Xen ( 607) 708 159.9 1.9e-36 >>gi|67472131|sp|Q7L804.1|RFIP2_HUMAN RecName: Full=Rab1 (512 aa) initn: 3363 init1: 3363 opt: 3363 Z-score: 3857.9 bits: 723.5 E(): 3.5e-206 Smith-Waterman score: 3363; 100.000% identity (100.000% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|674 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS 460 470 480 490 500 510 >>gi|114632976|ref|XP_001152274.1| PREDICTED: RAB11 fami (512 aa) initn: 3354 init1: 3354 opt: 3354 Z-score: 3847.6 bits: 721.6 E(): 1.3e-205 Smith-Waterman score: 3354; 99.609% identity (99.805% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|114 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|114 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGSPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|114 QRLSSAHSMSDLSGSHMSSEKLKAGTTGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS 460 470 480 490 500 510 >>gi|73998902|ref|XP_535026.2| PREDICTED: similar to Rab (615 aa) initn: 1700 init1: 1700 opt: 3232 Z-score: 3706.5 bits: 695.7 E(): 9.5e-198 Smith-Waterman score: 3232; 94.391% identity (98.646% similar) in 517 aa overlap (18-533:99-615) 10 20 30 40 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLK .. ::::::::::::::::::::::::::: gi|739 KRSFATCAHESSLTNENTETLGWGAAAQPPQRPRMMLSEQAQKWFPTHVQVTVLQAKDLK 70 80 90 100 110 120 50 60 70 80 90 100 KIAA09 PKGKSGTNDTYTIIQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIV ::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::: gi|739 PKGKSGTNDTYTIIQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGNPEKYILFLIV 130 140 150 160 170 180 110 120 130 140 150 160 KIAA09 MHRSLVGLDKFLGQVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNN ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|739 MHRSLVGLDKFLGQVAINLNDIFEDKQRRKTEWFRLESKQGKRAKNRGEIKVNIQFMRNN 190 200 210 220 230 240 170 180 190 200 210 220 KIAA09 MTASMFDLSMKDKTRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQ ::::::::::::::::::::::::::::::::::::::::::::.:.::::..::::::: gi|739 MTASMFDLSMKDKTRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSSHIPDANTDFSSGEIQ 250 260 270 280 290 300 230 240 250 260 270 280 KIAA09 MKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLK-AGTIGQTHLLGHQLDSFGTVPES :::::::::::::::::::::::::.:.:.:::::: :::::::::::...::::.:::: gi|739 MKSKPKKPFLLGPQRLSSAHSMSDLTGTHISSEKLKSAGTIGQTHLLGRHVDSFGVVPES 310 320 330 340 350 360 290 300 310 320 330 340 KIAA09 GSLKSPHRRTLSFDTSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPF ::::::::::::::::::::::: ::::: ::::::::::::::::::::::::::::: gi|739 GSLKSPHRRTLSFDTSKMNQPDSSVDEGESSFGRQNDPFTNVTASLPQKFATLPRKKNPF 370 380 390 400 410 420 350 360 370 380 390 400 KIAA09 EESSETWDSSMNLFSKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCD :::::.:::::::::: .:.:::::::::::::::::::::::::::::::::::::::: gi|739 EESSESWDSSMNLFSKSVEVRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCD 430 440 450 460 470 480 410 420 430 440 450 460 KIAA09 LKSPNAFSENRQDYFDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDAT ::::::::::::::::::::::::.:::::::::::::::.::::::::::::::::::: gi|739 LKSPNAFSENRQDYFDYESTNPFTTKFRASNIMPSSSFHMNPTSNEDLRKIPDSNPFDAT 490 500 510 520 530 540 470 480 490 500 510 520 KIAA09 AGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRK ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AGYRGLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRK 550 560 570 580 590 600 530 KIAA09 AGKFSNS ::::.:: gi|739 AGKFANS 610 >>gi|149689648|ref|XP_001494294.1| PREDICTED: similar to (512 aa) initn: 3219 init1: 3219 opt: 3219 Z-score: 3692.7 bits: 692.9 E(): 5.5e-197 Smith-Waterman score: 3219; 94.531% identity (98.828% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|149 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.::.::::::::::::::::::::::: gi|149 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGNPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 QVAINLNDIFEDKQRRKTEWFRLESKQGKRVKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP :::::::::::::::::::::::::::::::.:::::..::::::: ::::::::::::: gi|149 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSSHMPDASTEFSSGEIPMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:.: ::::::.:..:.:::::.:..:::.:::::::::::::::::: gi|149 QRLSSAHSMSDLTGTHTSSEKLKSGAVGHTHLLGRQIESFGVVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF ::::::::: ::::: ::::::::::::::::::::::::::::::::.:.:::::::: gi|149 TSKMNQPDSSVDEGESSFGRQNDPFTNVTASLPQKFATLPRKKNPFEESTESWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :: ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SKSIEVRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE ::::::::::.:::::::::::::::.:::::::::::::::::::::::.::::::::: gi|149 FDYESTNPFTTKFRASNIMPSSSFHMNPTSNEDLRKIPDSNPFDATAGYRGLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS 460 470 480 490 500 510 >>gi|149040527|gb|EDL94565.1| RAB11 family interacting p (512 aa) initn: 3194 init1: 3194 opt: 3194 Z-score: 3664.0 bits: 687.6 E(): 2.2e-195 Smith-Waterman score: 3194; 93.359% identity (98.828% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|149 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.::.::::::::::::::::::::::: gi|149 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGNPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP ::::::::::::::::.::.::::::::.::::::::: ::::::.:::::::::::::: gi|149 TRSPFAKLKDKMKGRKSDGVFSDTSSAIVPSTHMPDANPEFSSGEMQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:::.::::::..:.: ::::.::..:::.:::::::::::::::::: gi|149 QRLSSAHSMSDLTGSHLSSEKLKSSTVGPTHLLSHQINSFGVVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF :::.::: ::::::: :::::.::::::::::::::::::::::::::::: :::: ::: gi|149 TSKLNQPGSIVDEGEHCFGRQSDPFTNVTASLPQKFATLPRKKNPFEESSEPWDSSTNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::.:::.:::::::::::::::::.::::::::::::::::::::::.::.:::::: gi|149 SKPIEVRKESKREKREKVSLFERVTGKRDSRRSDKLNNGGSDSPCDLKSPSAFNENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE :.::::::::::::::.:::::::::.:::..:::::::::::::::::::::::::::: gi|149 FEYESTNPFTAKFRASTIMPSSSFHMNPTSSDDLRKIPDSNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFTNS 460 470 480 490 500 510 >>gi|194042110|ref|XP_001927936.1| PREDICTED: similar to (512 aa) initn: 3190 init1: 3190 opt: 3190 Z-score: 3659.4 bits: 686.7 E(): 4e-195 Smith-Waterman score: 3190; 93.750% identity (98.828% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|194 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.::.::::::::::::::::::::::: gi|194 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGNPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|194 QVAINLNDIFEDKQRRKTEWFRLESKQGKRAKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP :::::::::::::::::::::::::::::::.::::::.::::.:::::::::::::::: gi|194 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSSHMPDANTEFSSSEIQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:.:.::::::.:.:.::::::.:.. ::.:::::::::::::::::: gi|194 QRLSSAHSMSDLTGAHISSEKLKSGAIAQTHLLGRQIEPFGAVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF ::::::::: :.::: ::::.:::::::::::::::::::::::::::::.::::.::: gi|194 TSKMNQPDSNVEEGESSFGRQSDPFTNVTASLPQKFATLPRKKNPFEESSESWDSSVNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :: .:.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SKSVEVRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE ::::::::::.::::::::::::::..:::.::::::::::::::::::::::::::::: gi|194 FDYESTNPFTTKFRASNIMPSSSFHLNPTSSEDLRKIPDSNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|194 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFANS 460 470 480 490 500 510 >>gi|148669882|gb|EDL01829.1| RAB11 family interacting p (512 aa) initn: 3180 init1: 3180 opt: 3180 Z-score: 3647.9 bits: 684.6 E(): 1.7e-194 Smith-Waterman score: 3180; 93.359% identity (98.633% similar) in 512 aa overlap (22-533:1-512) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|148 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|148 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGSPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP ::::::::::::::::.::.::::::::.::::::::: ::::::.:::::::::::::: gi|148 TRSPFAKLKDKMKGRKSDGVFSDTSSAIVPSTHMPDANPEFSSGEMQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:::.::::::..:.: ::::..:.::::.:::::::::::::::::: gi|148 QRLSSAHSMSDLTGSHLSSEKLKSSTVGPTHLLSRQIDSFGVVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF :::.::: ::::::: ::::.::::::::::::::::::::::::::::: :::::::: gi|148 TSKLNQPGSIVDEGEHSFGRQSDPFTNVTASLPQKFATLPRKKNPFEESSEPWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::.:::.:::::::::::::::::.:::: :::::::::::::::::.::::::::: gi|148 SKPIEVRKESKREKREKVSLFERVTGKRDSRRPDKLNNGGSDSPCDLKSPSAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE :.::::::::::::::.::::::::..:::.::::::::.:::::::::::::::::::: gi|148 FEYESTNPFTAKFRASTIMPSSSFHVNPTSSEDLRKIPDNNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|148 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFTNS 460 470 480 490 500 510 >>gi|76655248|ref|XP_612748.2| PREDICTED: RAB11 family i (511 aa) initn: 3160 init1: 2270 opt: 3150 Z-score: 3613.5 bits: 678.3 E(): 1.4e-192 Smith-Waterman score: 3150; 92.773% identity (98.438% similar) in 512 aa overlap (22-533:1-511) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|766 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::.::.::::::::::::::::::::::: gi|766 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMQGNPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|766 QVAINLNDIFEDKQRRKTEWFRLESKQGKRAKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP ::::::::::::::::.::::::::::::::.:::::..::::.:::::::::::::::: gi|766 TRSPFAKLKDKMKGRKTDGTFSDTSSAIIPSSHMPDAHTEFSSSEIQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:.:. :::::.:...::::::.:.::::.:::::::::::::::::: gi|766 QRLSSAHSMSDLTGAHVCSEKLKSGAVAQTHLLGRQIDSFGAVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF ::::::::: :: :: ::::::::::::::::::::::::::::::::::.::::.::: gi|766 TSKMNQPDSSVDAGESAFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSESWDSSVNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :: ::.::::::::::::::::::::::: ::::::::::.::::::::::::::.:::: gi|766 SKSIEVRKENKREKREKVSLFERVTGKKD-RRSDKLNNGGADSPCDLKSPNAFSEHRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE ::::::::::.::::::::::::::..:::.:::::::.::::::::::::::::::::: gi|766 FDYESTNPFTTKFRASNIMPSSSFHVNPTSHEDLRKIPESNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::.:::::::::::::::::::::::::::::::::::::::. gi|766 LVKHKELLRRKDSHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNT 460 470 480 490 500 510 >>gi|74191964|dbj|BAE32923.1| unnamed protein product [M (529 aa) initn: 3132 init1: 3132 opt: 3132 Z-score: 3592.7 bits: 674.4 E(): 2.1e-191 Smith-Waterman score: 3132; 93.083% identity (98.419% similar) in 506 aa overlap (22-527:1-506) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|741 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::..::::::::::::::::::::::::: gi|741 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLMRGSPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP ::::::::::::::::.::.::::::::.::::::::: ::::::.:::::::::::::: gi|741 TRSPFAKLKDKMKGRKSDGVFSDTSSAIVPSTHMPDANPEFSSGEMQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD ::::::::::::.:::.::::::..:.: ::::..:.::::.:::::::::::::::::: gi|741 QRLSSAHSMSDLTGSHLSSEKLKSSTVGPTHLLSRQIDSFGVVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF : :.::: ::::::: ::::.::::::::::::::::::::::::::::: :::::::: gi|741 TPKLNQPGSIVDEGEHSFGRQSDPFTNVTASLPQKFATLPRKKNPFEESSEPWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::.:::.:::::::::::::::::.:::: :::::::::::::::::.::::::::: gi|741 SKPIEVRKESKREKREKVSLFERVTGKRDSRRPDKLNNGGSDSPCDLKSPSAFSENRQDY 340 350 360 370 380 390 430 440 450 460 470 480 KIAA09 FDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQE :.::::::::::::::.::::::::..:::.::::::::.:::::::::::::::::::: gi|741 FEYESTNPFTAKFRASTIMPSSSFHVNPTSSEDLRKIPDNNPFDATAGYRSLTYEEVLQE 400 410 420 430 440 450 490 500 510 520 530 KIAA09 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS ::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAVYTQDHLSPGPPH 460 470 480 490 500 510 gi|741 LCGEATSTHS 520 >>gi|67106797|gb|AAY67796.1| RAB11-FIP2 long isoform [Ho (532 aa) initn: 3344 init1: 2772 opt: 2774 Z-score: 3181.9 bits: 598.4 E(): 1.6e-168 Smith-Waterman score: 3307; 96.053% identity (96.053% similar) in 532 aa overlap (22-533:1-532) 10 20 30 40 50 60 KIAA09 ALPPGGALPVLGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI ::::::::::::::::::::::::::::::::::::::: gi|671 MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTI 10 20 30 70 80 90 100 110 120 KIAA09 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 IQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLG 40 50 60 70 80 90 130 140 150 160 170 180 KIAA09 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 QVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDK 100 110 120 130 140 150 190 200 210 220 230 240 KIAA09 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 TRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLGP 160 170 180 190 200 210 250 260 270 280 290 300 KIAA09 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 QRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTLSFD 220 230 240 250 260 270 310 320 330 340 350 360 KIAA09 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 TSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDSSMNLF 280 290 300 310 320 330 370 380 390 400 410 420 KIAA09 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 SKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAFSENRQDY 340 350 360 370 380 390 430 440 450 460 KIAA09 FDYESTNPFTAKFRASNIMPSSS--------------------FHMSPTSNEDLRKIPDS :::::::::::::::::::::: ::::::::::::::::: gi|671 FDYESTNPFTAKFRASNIMPSSRNTLLTPAVAEWRGSLRWAELFHMSPTSNEDLRKIPDS 400 410 420 430 440 450 470 480 490 500 510 520 KIAA09 NPFDATAGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|671 NPFDATAGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVP 460 470 480 490 500 510 530 KIAA09 YEPSRKAGKFSNS ::::::::::::: gi|671 YEPSRKAGKFSNS 520 530 533 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 07:35:07 2009 done: Fri Mar 6 07:39:32 2009 Total Scan time: 1587.310 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]