hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17254465/chunk_1/iprscan-20080502-17254465.nocrc
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Query sequence: KIAA0941
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       72.9    4.1e-21   1
PF00168.20.ls C2 domain                                       74.8    2.5e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/1      36   123 ..     1    88 []    72.9  4.1e-21
PF00168.20.ls   1/1      36   123 ..     1    88 []    74.8  2.5e-19

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 1, from 36 to 123: score 72.9, E = 4.1e-21
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      + Vtv++Ak+L+pk  k+g+ D+Y  ++lg+     k+ T+v++ktl
    KIAA0941    36    VQVTVLQAKDLKPKG-KSGTNDTYTIIQLGK----EKYSTSVAEKTL 77   

                   NPvWNEtFtFevpppdlqe.....tLeieVyDydrfgrddflGevs<-*
                    PvW E+  Fe+p    q ++++ +L + V+++  +g d+flG+v    
    KIAA0941    78 EPVWKEEASFELPGLLIQGspekyILFLIVMHRSLVGLDKFLGQVA    123  

PF00168.20.ls: domain 1 of 1, from 36 to 123: score 74.8, E = 2.5e-19
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      + Vtv++Ak+L+pk  k+g+ D+Y  ++lg+     k+ T+v++ktl
    KIAA0941    36    VQVTVLQAKDLKPKG-KSGTNDTYTIIQLGK----EKYSTSVAEKTL 77   

                   NPvWNEtFtFevpppdlqe.....tLeieVyDydrfgrddflGevs<-*
                    PvW E+  Fe+p    q ++++ +L + V+++  +g d+flG+v    
    KIAA0941    78 EPVWKEEASFELPGLLIQGspekyILFLIVMHRSLVGLDKFLGQVA    123  

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