hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17424669/chunk_1/iprscan-20080502-17424669.nocrc
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Query sequence: KIAA0950
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01027.11.ls Uncharacterised protein family UPF0005         114.9    2.1e-31   1
PF01027.11.fs Uncharacterised protein family UPF0005         113.5    5.5e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01027.11.fs   1/1     122   342 ..     1   460 []   113.5  5.5e-31
PF01027.11.ls   1/1     122   342 ..     1   460 []   114.9  2.1e-31

Alignments of top-scoring domains:
PF01027.11.fs: domain 1 of 1, from 122 to 342: score 113.5, E = 5.5e-31
                   *->wklgkqdprRvvyalkvg...laLlLvsllayirpvldsvgenaiwa
                      ++  +  ++R+vy +++++  ++L++v+l+ ++ pv d v++n  w 
    KIAA0950   122    DQKVRRVFVRKVYTILLIqllVTLAVVALFTFCDPVKDYVQANPGWY 168  

                   iltvvvvlefsLvclivLSccvgatlnkglnrvlltlfAgllgvgvgpia
                      + v ++  L     L+cc g ++ +++n++llt+f++++++  g+++
    KIAA0950   169 WASYAVFFATYL----TLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLS 214  

                   smygaifepiilvisaFgitaavfffrslpslktryDygfqlgfiLtfal
                   s y+       +v+ ++gita+v+ +++++s++t++D+++ + ++L++ l
    KIAA0950   215 SYYNT-----TSVLLCLGITALVCLSVTVFSFQTKFDFTS-CQGVLFVLL 258  

                   ivlsgfriga.ltnlffWtAssrlsliisgagillfvgyilydtqaiedl
                   ++l+  +++  +   f     ++l+ +++++g+ +f+++++ dtq+++++
    KIAA0950   259 MTLFFSGLILaILLPFQ-Y-VPWLHAVYAALGAGVFTLFLALDTQLLMGN 306  

                   hkliannfeklAdSLEgCVneYLeeeeyerepskiltyeasedpvysgYr
                   ++  +                                             
    KIAA0950   307 RRHSL--------------------------------------------- 311  

                   SvLnSkspeeyiAnfAkWEPpHGrfkfrhPWknYVKvGgalRhCAytVmA
                         speeyi                                      
    KIAA0950   312 ------SPEEYI-------------------------------------- 317  

                   LHGCilsEiQAPeelRqkFkeelqrvsEgaKvLreLaeslkkMrklspsi
                                                                     
    KIAA0950     - -------------------------------------------------- -    

                   llddvhsAaeeLqskIdsksyLlvnSesweiikrttetsgeameresnes
                                                                     
    KIAA0950     - -------------------------------------------------- -    

                   mmllkreswpsrsaateeeseerqvdleermkslEsaeaLSlaaaasLyl
                                                             ++a+++yl
    KIAA0950   318 ------------------------------------------FGALNIYL 325  

                   dfvnlFlslLeilgels<-*
                   d++++F   L+ +g+++   
    KIAA0950   326 DIIYIFTFFLQLFGTNR    342  

PF01027.11.ls: domain 1 of 1, from 122 to 342: score 114.9, E = 2.1e-31
                   *->wklgkqdprRvvyalkvg...laLlLvsllayirpvldsvgenaiwa
                      ++  +  ++R+vy +++++  ++L++v+l+ ++ pv d v++n  w 
    KIAA0950   122    DQKVRRVFVRKVYTILLIqllVTLAVVALFTFCDPVKDYVQANPGWY 168  

                   iltvvvvlefsLvclivLSccvgatlnkglnrvlltlfAgllgvgvgpia
                      + v ++  L     L+cc g ++ +++n++llt+f++++++  g+++
    KIAA0950   169 WASYAVFFATYL----TLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLS 214  

                   smygaifepiilvisaFgitaavfffrslpslktryDygfqlgfiLtfal
                   s y+       +v+ ++gita+v+ +++++s++t++D+++ + ++L++ l
    KIAA0950   215 SYYNT-----TSVLLCLGITALVCLSVTVFSFQTKFDFTS-CQGVLFVLL 258  

                   ivlsgfriga.ltnlffWtAssrlsliisgagillfvgyilydtqaiedl
                   ++l+  +++  +   f     ++l+ +++++g+ +f+++++ dtq+++++
    KIAA0950   259 MTLFFSGLILaILLPFQ-Y-VPWLHAVYAALGAGVFTLFLALDTQLLMGN 306  

                   hkliannfeklAdSLEgCVneYLeeeeyerepskiltyeasedpvysgYr
                   ++  +                                             
    KIAA0950   307 RRHSL--------------------------------------------- 311  

                   SvLnSkspeeyiAnfAkWEPpHGrfkfrhPWknYVKvGgalRhCAytVmA
                         speeyi                                      
    KIAA0950   312 ------SPEEYI-------------------------------------- 317  

                   LHGCilsEiQAPeelRqkFkeelqrvsEgaKvLreLaeslkkMrklspsi
                                                                     
    KIAA0950     - -------------------------------------------------- -    

                   llddvhsAaeeLqskIdsksyLlvnSesweiikrttetsgeameresnes
                                                                     
    KIAA0950     - -------------------------------------------------- -    

                   mmllkreswpsrsaateeeseerqvdleermkslEsaeaLSlaaaasLyl
                                                             ++a+++yl
    KIAA0950   318 ------------------------------------------FGALNIYL 325  

                   dfvnlFlslLeilgels<-*
                   d++++F   L+ +g+++   
    KIAA0950   326 DIIYIFTFFLQLFGTNR    342  

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