hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17460478/chunk_1/iprscan-20080502-17460478.nocrc
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Query sequence: KIAA0952
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08005.2.fs PHR domain                                     285.5    4.3e-88   1
PF08005.2.ls PHR domain                                     287.4    2.6e-83   1
PF00651.21.ls BTB/POZ domain                                 104.9    2.1e-28   1
PF00651.21.fs BTB/POZ domain                                 103.2    2.8e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00651.21.fs   1/1     132   237 ..     1   135 []   103.2  2.8e-28
PF00651.21.ls   1/1     132   237 ..     1   135 []   104.9  2.1e-28
PF08005.2.fs   1/1     393   539 .]     1   163 []   285.5  4.3e-88
PF08005.2.ls   1/1     393   539 .]     1   163 []   287.4  2.6e-83

Alignments of top-scoring domains:
PF00651.21.fs: domain 1 of 1, from 132 to 237: score 103.2, E = 2.8e-28
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                       n+l+      DV +vvg  +g    +++++ HK vLa  S++F+a+
    KIAA0952   132    NNDLMA-----DVHFVVGPPGG----TQRLPGHKYVLAVGSSVFHAM 169  

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   F g +      e+++   ei ++dv+p +f a+L++iY++e+++      
    KIAA0952   170 FYGEL-----AEDKD---EIRIPDVEPAAFLAMLKYIYCDEIDLA----- 206  

                   PssckseenvedlLaaAadllqipslvdaCeefliksl<-*
                          ++v + L+aA +++ +p+l +aC +fl +sl   
    KIAA0952   207 ------ADTVLATLYAA-KKYIVPHLARACVNFLETSL    237  

PF00651.21.ls: domain 1 of 1, from 132 to 237: score 104.9, E = 2.1e-28
                   *->lnelrkqgelcDVtLvvgdgsgrydvgkkfkAHKavLaacSpYFkal
                       n+l+      DV +vvg  +g    +++++ HK vLa  S++F+a+
    KIAA0952   132    NNDLMA-----DVHFVVGPPGG----TQRLPGHKYVLAVGSSVFHAM 169  

                   FtgqfkesiteeessvsseieledvspedfealLefiYtgelsitqdqks
                   F g +      e+++   ei ++dv+p +f a+L++iY++e+++      
    KIAA0952   170 FYGEL-----AEDKD---EIRIPDVEPAAFLAMLKYIYCDEIDLA----- 206  

                   PssckseenvedlLaaAadllqipslvdaCeefliksl<-*
                          ++v + L+aA +++ +p+l +aC +fl +sl   
    KIAA0952   207 ------ADTVLATLYAA-KKYIVPHLARACVNFLETSL    237  

PF08005.2.fs: domain 1 of 1, from 393 to 539: score 285.5, E = 4.3e-88
                   *->nRFqrvsaRggtWgySngsvDAIaFsVDkrGIfivGfGlYGgisGey
                      +RFq++++R+++W+y +g++D+I+F+VDkr +fi+GfGlYG+++G++
    KIAA0952   393    HRFQSCAYRSNQWRY-RGRCDSIQFAVDKR-VFIAGFGLYGSSCGSA 437  

                   eyklkllydlgtHagdldhsekwttLesvtteyssDcGasetaevrFdeP
                   ey+ k+         +l+++++  +L+++ ++y+sD G+s+t++v+F++P
    KIAA0952   438 EYSAKI---------ELKRQGV--VLGQNLSKYFSD-GSSNTFPVWFEYP 475  

                   VlikpnvwYavrarisGpslSdcGdkGmtsVstpdGkVtFqFsssslSnN
                   V+i+p+++Y++++ ++G++lS++G++Gmt+V++  GkVt+qF++ss+S+N
    KIAA0952   476 VQIEPDTFYTASVILDGNELSYFGQEGMTEVQC--GKVTVQFQCSSDSTN 523  

                   GTtVqrGQIPeILYYl<-*
                   GT+Vq+GQIPe+++Y+   
    KIAA0952   524 GTGVQGGQIPELIFYA    539  

PF08005.2.ls: domain 1 of 1, from 393 to 539: score 287.4, E = 2.6e-83
                   *->nRFqrvsaRggtWgySngsvDAIaFsVDkrGIfivGfGlYGgisGey
                      +RFq++++R+++W+y +g++D+I+F+VDkr +fi+GfGlYG+++G++
    KIAA0952   393    HRFQSCAYRSNQWRY-RGRCDSIQFAVDKR-VFIAGFGLYGSSCGSA 437  

                   eyklkllydlgtHagdldhsekwttLesvtteyssDcGasetaevrFdeP
                   ey+ k+         +l+++++  +L+++ ++y+sD G+s+t++v+F++P
    KIAA0952   438 EYSAKI---------ELKRQGV--VLGQNLSKYFSD-GSSNTFPVWFEYP 475  

                   VlikpnvwYavrarisGpslSdcGdkGmtsVstpdGkVtFqFsssslSnN
                   V+i+p+++Y++++ ++G++lS++G++Gmt+V++  GkVt+qF++ss+S+N
    KIAA0952   476 VQIEPDTFYTASVILDGNELSYFGQEGMTEVQC--GKVTVQFQCSSDSTN 523  

                   GTtVqrGQIPeILYYl<-*
                   GT+Vq+GQIPe+++Y+   
    KIAA0952   524 GTGVQGGQIPELIFYA    539  

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