hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17541054/chunk_1/iprscan-20080502-17541054.nocrc
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Query sequence: KIAA0957
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 171.3    9.7e-47   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/8      10    39 ..     1    30 []     6.0  7.4e+02
SM00248    2/8      42    71 ..     1    30 []    38.2  1.1e-06
SM00248    3/8      75   104 ..     1    30 []    15.5      7.3
SM00248    4/8     108   137 ..     1    30 []    26.5   0.0038
SM00248    5/8     141   170 ..     1    30 []    16.7      3.2
SM00248    6/8     174   203 ..     1    30 []    29.5  0.00047
SM00248    7/8     207   236 ..     1    30 []    30.7   0.0002
SM00248    8/8     240   270 ..     1    30 []     8.2  3.7e+02

Alignments of top-scoring domains:
SM00248: domain 1 of 8, from 10 to 39: score 6.0, E = 7.4e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                           L +Aa++g+ e v  L++kga + +   
    KIAA0957    10    ALSERLLVAAYKGQTENVVQLINKGARVAV    39   

SM00248: domain 2 of 8, from 42 to 71: score 38.2, E = 1.1e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpLHlAa +g+l vv++Ll++g d+++   
    KIAA0957    42    HGRTPLHLAANKGHLPVVQILLKAGCDLDV    71   

SM00248: domain 3 of 8, from 75 to 104: score 15.5, E = 7.3
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       ++T+LH A   gn e++ +L+ +g  ++    
    KIAA0957    75    GDQTALHRATVVGNTEIIAALIHEGCALDR    104  

SM00248: domain 4 of 8, from 108 to 137: score 26.5, E = 0.0038
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+T+LH A  +g    +klL+++ga++ a   
    KIAA0957   108    DGNTALHEASWHGFSQSAKLLVKAGANVLA    137  

SM00248: domain 5 of 8, from 141 to 170: score 16.7, E = 3.2
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LHlA++n +    + Ll +g   ++   
    KIAA0957   141    AGNTALHLACQNSHSQSTRVLLLAGSRADL    170  

SM00248: domain 6 of 8, from 174 to 203: score 29.5, E = 0.00047
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH+Aa++++l++++lLl +  ++++   
    KIAA0957   174    AGDTCLHVAARYNHLSIIRLLLTAFCSVHE    203  

SM00248: domain 7 of 8, from 207 to 236: score 30.7, E = 0.0002
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH+Aa+ ++++v+k+Ll++gad ++   
    KIAA0957   207    AGDTALHVAAALNHKKVAKILLEAGADTTI    236  

SM00248: domain 8 of 8, from 240 to 270: score 8.2, E = 3.7e+02
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                       G+TpL  A +++n+ev+ lL ++  +++ a   
    KIAA0957   240    AGQTPLETARYHNNPEVALLLTKAPQgSVSA    270  

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