hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18043039/chunk_1/iprscan-20080502-18043039.nocrc
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Query sequence: KIAA0962
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00271                                                 116.1    3.9e-30   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00271    1/1      68   125 ..     1    72 []   116.1  3.9e-30

Alignments of top-scoring domains:
SM00271: domain 1 of 1, from 68 to 125: score 116.1, E = 3.9e-30
                   *->tdyYeiLGvskdAsddeIKKAYRkLAlkyHPDKnpgdpelseeklpe
                       d+Y +LGvs++As+++IKKAY+kLA+++HPDKn+            
    KIAA0962    68    FDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK------------ 102  

                   eekeeAeekFkeIneAYevLsDpek<-*
                     +++Ae+kF +I++AYe+Ls++ek   
    KIAA0962   103 --DPGAEDKFIQISKAYEILSNEEK    125  

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