hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-18144139/chunk_1/iprscan-20080502-18144139.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0968 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 347.7 1.8e-101 1 PF00069.15.fs Protein kinase domain 345.8 6.7e-101 1 PF08332.1.ls Calcium/calmodulin dependent protein kina 319.6 5e-93 1 PF08332.1.fs Calcium/calmodulin dependent protein kina 317.6 2e-92 1 PF07714.7.fs Protein tyrosine kinase 40.5 1.2e-11 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07714.7.fs 1/2 62 146 .. 1 97 [. 34.6 5.9e-10 PF00069.15.fs 1/1 62 320 .. 1 287 [] 345.8 6.7e-101 PF00069.15.ls 1/1 62 320 .. 1 287 [] 347.7 1.8e-101 PF08332.1.ls 1/1 395 522 .. 1 128 [] 319.6 5e-93 PF08332.1.fs 1/1 395 522 .. 1 128 [] 317.6 2e-92 Alignments of top-scoring domains: PF07714.7.fs: domain 1 of 2, from 62 to 146: score 34.6, E = 5.9e-10 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei +l ++LG+GaF +V +++ +++ A K+++ + + s ++ KIAA0968 62 YQLFEELGKGAFSVVRRCVKV----LAGQEYAAKIInTK-KLSARD- 102 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd ++++ rEA+i + l +HpNiVrL+ +++ ++ +y+++ ++ gG KIAA0968 103 -HQKLEREARICRLL-KHPNIVRLHDSISE-EGH----HYLIFDLVTGGE 145 L<-* L KIAA0968 146 L 146 PF00069.15.fs: domain 1 of 1, from 62 to 320: score 345.8, E = 6.7e-101 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y+l e lG+G+f++V++++++ g+++A Kii+ +k + ++ + r KIAA0968 62 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER 108 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i + L+HpNIvrl+d+ +++h yl+++++ gG +Lf+ + KIAA0968 109 --EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG----ELFEDIV- 151 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ + se +a +++ Qil+++ ++H++g++HRDLKPeN+Ll KIAA0968 152 --AREYY--SEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLA-SKL 196 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD +a +K+aDFGlA + ++ ++ +f+GTp+Y++PEvl+ +yg++vD KIAA0968 197 KGAAVKLADFGLAIEV-EgEQQaWFGFAGTPGYLSPEVLR-KDPYGKPVD 244 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi W++Gvily+ll G+pPF++e dq l+++i+ + ++f+spewd++ KIAA0968 245 LWACGVILYILLVGYPPFWDE-----DQHRLYQQIKAGAYDFPSPEWDTV 289 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +eakdLi+k+L+ +PskR+ta+e+l+HPw+ KIAA0968 290 T-----------PEAKDLINKMLTINPSKRITAAEALKHPWI 320 PF00069.15.ls: domain 1 of 1, from 62 to 320: score 347.7, E = 1.8e-101 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y+l e lG+G+f++V++++++ g+++A Kii+ +k + ++ + r KIAA0968 62 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER 108 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i + L+HpNIvrl+d+ +++h yl+++++ gG +Lf+ + KIAA0968 109 --EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG----ELFEDIV- 151 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ + se +a +++ Qil+++ ++H++g++HRDLKPeN+Ll KIAA0968 152 --AREYY--SEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLA-SKL 196 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD +a +K+aDFGlA + ++ ++ +f+GTp+Y++PEvl+ +yg++vD KIAA0968 197 KGAAVKLADFGLAIEV-EgEQQaWFGFAGTPGYLSPEVLR-KDPYGKPVD 244 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi W++Gvily+ll G+pPF++e dq l+++i+ + ++f+spewd++ KIAA0968 245 LWACGVILYILLVGYPPFWDE-----DQHRLYQQIKAGAYDFPSPEWDTV 289 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +eakdLi+k+L+ +PskR+ta+e+l+HPw+ KIAA0968 290 T-----------PEAKDLINKMLTINPSKRITAAEALKHPWI 320 PF08332.1.ls: domain 1 of 1, from 395 to 522: score 319.6, E = 5e-93 *->eeqEivkvterlieAIaeGDfetYtklcdpdltaFePealgnlveGl ++qEi+kvte+lieAI++GDfe+Ytk+cdp++taFePealgnlveGl KIAA0968 395 RKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGL 441 eFHrFYFEnfLgkrkkavhttilnphVhllGDdaAciAYvrLtqlmDknG +FHrFYFEn++++++k+vhttilnph+hl+GD++AciAY+r+tq++D G KIAA0968 442 DFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGG 491 lahtvqseETRVweKrdGkWqiVHvHrSaap<-* +++t+qseETRVw++rdGkWqiVH+HrS+ap KIAA0968 492 IPRTAQSEETRVWHRRDGKWQIVHFHRSGAP 522 PF08332.1.fs: domain 1 of 1, from 395 to 522: score 317.6, E = 2e-92 *->eeqEivkvterlieAIaeGDfetYtklcdpdltaFePealgnlveGl ++qEi+kvte+lieAI++GDfe+Ytk+cdp++taFePealgnlveGl KIAA0968 395 RKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGL 441 eFHrFYFEnfLgkrkkavhttilnphVhllGDdaAciAYvrLtqlmDknG +FHrFYFEn++++++k+vhttilnph+hl+GD++AciAY+r+tq++D G KIAA0968 442 DFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGG 491 lahtvqseETRVweKrdGkWqiVHvHrSaap<-* +++t+qseETRVw++rdGkWqiVH+HrS+ap KIAA0968 492 IPRTAQSEETRVWHRRDGKWQIVHFHRSGAP 522 //