hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18144139/chunk_1/iprscan-20080502-18144139.nocrc
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Query sequence: KIAA0968
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 371.6   4.7e-107   1
SM00219                                                  18.5    2.8e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      62   320 ..     1   280 []    18.5  2.8e-12
SM00220    1/1      62   320 ..     1   231 []   371.6 4.7e-107

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 62 to 320: score 18.5, E = 2.8e-12
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                       +l ++LG GaF +V++++    ++e A K ++  + + ++++ + r
    KIAA0968    62    YQLFEELGKGAFSVVRRCVKVlagQEYAAKIINTKKlsardHQKLER 108  

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   Ea+i + l  kHpNiV+L+  ++ee       + +++++ ++ gG L + 
    KIAA0968   109 EARICRLL--KHPNIVRLHDSISEE-------GHHYLIFDLVTGGELFED 149  

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk..
                   + +++   s +d  +   QI +   + +++++vHRDL   N L+++++++
    KIAA0968   150 IVAREY-YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLkg 198  

                   .vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslk
                     vK +DFGL+ +++ +      +     +   g+ +      ++PE+l+
    KIAA0968   199 aAVKLADFGLAIEVEGE-----QQAWFGFA---GTPG-----YLSPEVLR 235  

                   dgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyR
                   +  +    D W+ GV L+ i+  G +P ++      +  ++++++k+G +
    KIAA0968   236 KDPYGKPVDLWACGVILY-ILLVGYPPFWD-----EDQHRLYQQIKAGAY 279  

                   lpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                     + ++       t ++e  dl+ +    +P++R t +e  ++  +   
    KIAA0968   280 DFPSPE-----WDTVTPEAKDLINKMLTINPSKRITAAEAlkHPWI    320  

SM00220: domain 1 of 1, from 62 to 320: score 371.6, E = 4.7e-107
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                      Y+l ++lGkGaF++V++++++  g+++A K+i++++ + +++++++r
    KIAA0968    62    YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINtkklsardhQKLER 108  

                   EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr
                   E +i++  +HPNIV+L+d++ ++++ yl+++++ G  G+Lf+ ++ r + 
    KIAA0968   109 EARICRLlKHPNIVRLHDSISEeGHHYLIFDLVTG--GELFEDIVAREY- 155  

                   glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds.....h
                        +sE +a + ++Qil+a+ ++H++g++HRDLKPeN+LL s+ ++  
    KIAA0968   156 -----YSEaDASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASklkgaA 200  

                   vKlaDFGlArql.......ttfvGTpeYmAPEvl...gYgkpavDiWSlG
                   vKlaDFGlA +++++++    f GTp Y++PEvl++++Ygk +vD W++G
    KIAA0968   201 VKLADFGLAIEVegeqqawFGFAGTPGYLSPEVLrkdPYGK-PVDLWACG 249  

                   cilyElltGkpPFp..qldlifkkig..............SpeakdLikk
                   +ily+ll+G+pPF+++++++++++i+ + ++ +++++++ +peakdLi+k
    KIAA0968   250 VILYILLVGYPPFWdeDQHRLYQQIKagaydfpspewdtvTPEAKDLINK 299  

                   lLvkdPekRlta.eaLedeldikaHPff<-*
                   +L+ +P+kR+ta eaL+       HP++   
    KIAA0968   300 MLTINPSKRITAaEALK-------HPWI    320  

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