hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18212471/chunk_1/iprscan-20080502-18212471.nocrc
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Query sequence: KIAA0972
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 278.6    4.8e-79  10
SM00349                                                 138.8    5.9e-37   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00349      1/1      65   125 ..     1    62 []   138.8  5.9e-37
SM00355      1/10    273   295 ..     1    23 []     4.9       89
SM00355      2/10    423   445 ..     1    23 []    31.1  0.00015
SM00355      3/10    451   473 ..     1    23 []    30.5  0.00022
SM00355      4/10    479   501 ..     1    23 []    31.6  0.00011
SM00355      5/10    507   529 ..     1    23 []    30.2  0.00029
SM00355      6/10    535   557 ..     1    23 []    32.5  5.7e-05
SM00355      7/10    563   585 ..     1    23 []    28.2   0.0011
SM00355      8/10    591   613 ..     1    23 []    30.4  0.00024
SM00355      9/10    619   641 ..     1    23 []    27.0   0.0027
SM00355     10/10    647   669 ..     1    23 []    32.2  7.1e-05

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 65 to 125: score 138.8, E = 5.9e-37
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                      V+F+DV+++F+qEEW+q+ p Q+nLYRdVMlENYsnLvS+G ++  k
    KIAA0972    65    VSFKDVTIEFTQEEWQQMAPVQKNLYRDVMLENYSNLVSVG-YCCFK 110  

                   pdliskLEqgeEpwi<-*
                   p++i+kLEqgeEpw    
    KIAA0972   111 PEVIFKLEQGEEPWF    125  

SM00355: domain 1 of 10, from 273 to 295: score 4.9, E = 89
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++  gk f++k + ++H  +H   
    KIAA0972   273    FECNK-IGKAFNDKaNCVKHNSSH    295  

SM00355: domain 2 of 10, from 423 to 445: score 31.1, E = 0.00015
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgksf++k++L++H+r+H   
    KIAA0972   423    YKCNE-CGKSFCQKgHLIQHQRTH    445  

SM00355: domain 3 of 10, from 451 to 473: score 30.5, E = 0.00022
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk+fs+k++L  H+r+H   
    KIAA0972   451    FECSE-CGKTFSQKsHLSTHQRIH    473  

SM00355: domain 4 of 10, from 479 to 501: score 31.6, E = 0.00011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgk+f +k+ L+ H+r+H   
    KIAA0972   479    YKCNE-CGKTFVQKsTLRGHQRIH    501  

SM00355: domain 5 of 10, from 507 to 529: score 30.2, E = 0.00029
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk+f +k+ L+ H r+H   
    KIAA0972   507    YECSE-CGKTFVQKsTLRDHHRIH    529  

SM00355: domain 6 of 10, from 535 to 557: score 32.5, E = 5.7e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk+f +k++L+ H+r+H   
    KIAA0972   535    FQCNQ-CGKTFGQKsNLRIHQRTH    557  

SM00355: domain 7 of 10, from 563 to 585: score 28.2, E = 0.0011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ C ksf +k++L++H+++H   
    KIAA0972   563    YQCNE-CEKSFWRKdHLIQHQKTH    585  

SM00355: domain 8 of 10, from 591 to 613: score 30.4, E = 0.00024
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cgk+f + + L+ H+r+H   
    KIAA0972   591    FKCNE-CGKTFARTsTLRVHQRIH    613  

SM00355: domain 9 of 10, from 619 to 641: score 27.0, E = 0.0027
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cgk+f +k  L  H+r+H   
    KIAA0972   619    FKCNE-CGKKFVRKaILSDHQRIH    641  

SM00355: domain 10 of 10, from 647 to 669: score 32.2, E = 7.1e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk+f +k++L+ H+r+H   
    KIAA0972   647    FQCNK-CGKTFGQKsNLRIHQRTH    669  

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