hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-19062085/chunk_1/iprscan-20080502-19062085.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0999 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 349.8 4.1e-102 1 PF00069.15.fs Protein kinase domain 348.0 1.5e-101 1 PF07714.7.fs Protein tyrosine kinase 95.6 1.2e-27 2 PF07714.7.ls Protein tyrosine kinase 96.8 5.8e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07714.7.fs 1/2 116 258 .. 1 158 [. 87.8 2.1e-25 PF00069.15.fs 1/1 116 367 .. 1 287 [] 348.0 1.5e-101 PF00069.15.ls 1/1 116 367 .. 1 287 [] 349.8 4.1e-102 PF07714.7.ls 1/1 116 367 .. 1 272 [] 96.8 5.8e-26 Alignments of top-scoring domains: PF07714.7.fs: domain 1 of 2, from 116 to 258: score 87.8, E = 2.1e-25 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei ++++++G+G+F +V ++t t+ kVA+K+++k + +ee+ KIAA0999 116 YEIDRTIGKGNFAVVKRATHL----VTKAKVAIKIIdKT-QLDEEN- 156 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++ +rE++iMk l Hp+i+rL+ v ++ +y+VtEy+ gG KIAA0999 157 -LKKIFREVQIMKML-CHPHIIRLYQVMET-ERM----IYLVTEYASGGE 199 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d+L +h ++ k+ Qi + + + +n+vHRDL A N L+ KIAA0999 200 IFDHLVAH---GRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLL 246 senlvVKIsDFG<-* + nl +KI+DFG KIAA0999 247 DANLNIKIADFG 258 PF00069.15.fs: domain 1 of 1, from 116 to 367: score 348.0, E = 1.5e-101 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ye+ +++G+G+f++V++a+h t +VA+Kii+k +++ +k +r KIAA0999 116 YEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDEENLKKIFR 162 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E+qi+k+L+Hp+I+rl+ v+e+++ +ylV+Ey+ gG + fd+l KIAA0999 163 --EVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGG----EIFDHLV- 205 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++g++ e+ea++ ++Qi+ +++++H ++i+HRDLK eN+Lld n + KIAA0999 206 --AHGRM--AEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLN 251 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + KiaDFG++ + ++++ l+t +G+p+Y+APE+ g +++g+kvD KIAA0999 252 I----KIADFGFSNL--FtPGQlLKTWCGSPPYAAPELFEGKEYDGPKVD 295 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGv+ly l++G +PF+g+ + + l +++l+++++++++ + KIAA0999 296 IWSLGVVLYVLVCGALPFDGS-----TLQNLRARVLSGKFRIPFFMS--- 337 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* e+ +Li+ +L +DP+kRl+ e+i++H+w+ KIAA0999 338 ------------TECEHLIRHMLVLDPNKRLSMEQICKHKWM 367 PF00069.15.ls: domain 1 of 1, from 116 to 367: score 349.8, E = 4.1e-102 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ye+ +++G+G+f++V++a+h t +VA+Kii+k +++ +k +r KIAA0999 116 YEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDEENLKKIFR 162 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E+qi+k+L+Hp+I+rl+ v+e+++ +ylV+Ey+ gG + fd+l KIAA0999 163 --EVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGG----EIFDHLV- 205 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++g++ e+ea++ ++Qi+ +++++H ++i+HRDLK eN+Lld n + KIAA0999 206 --AHGRM--AEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLN 251 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + KiaDFG++ + ++++ l+t +G+p+Y+APE+ g +++g+kvD KIAA0999 252 I----KIADFGFSNL--FtPGQlLKTWCGSPPYAAPELFEGKEYDGPKVD 295 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGv+ly l++G +PF+g+ + + l +++l+++++++++ + KIAA0999 296 IWSLGVVLYVLVCGALPFDGS-----TLQNLRARVLSGKFRIPFFMS--- 337 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* e+ +Li+ +L +DP+kRl+ e+i++H+w+ KIAA0999 338 ------------TECEHLIRHMLVLDPNKRLSMEQICKHKWM 367 PF07714.7.ls: domain 1 of 1, from 116 to 367: score 96.8, E = 5.8e-26 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei ++++++G+G+F +V ++t t+ kVA+K+++k + +ee+ KIAA0999 116 YEIDRTIGKGNFAVVKRATHL----VTKAKVAIKIIdKT-QLDEEN- 156 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++ +rE++iMk l Hp+i+rL+ v ++ +y+VtEy+ gG KIAA0999 157 -LKKIFREVQIMKML-CHPHIIRLYQVMET-ERM----IYLVTEYASGGE 199 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d+L +h ++ k+ Qi + + + +n+vHRDL A N L+ KIAA0999 200 IFDHLVAH---GRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLL 246 senlvVKIsDFGLaRdiynddyYvrkkgggklPvkWm......APEslky + nl +KI+DFG + + + ++ k W+++++ APE + KIAA0999 247 DANLNIKIADFGFSNLF-------TPGQLLKT---WCgsppyaAPELFEG 286 gkFt.skSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLpr +++ + k D+WS GV+L+ ++ G+ P + g + + + +++ R p KIAA0999 287 KEYDgPKVDIWSLGVVLYVLVC-GALP-FDGSTLQNLRARVLSGKFRIPF 334 PenCPdelYdlMlqCWaedPedRPtFsel..veeL<-* + + e +l+++ dP++R +++++ ++ + KIAA0999 335 FM--STECEHLIRHMLVLDPNKRLSMEQIckHKWM 367 //