hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14340506/chunk_1/iprscan-20080501-14340506.nocrc
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Query sequence: KIAA1001
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF00884.13.ls Sulfatase                                     174.8    1.9e-49   1
PF00884.13.fs Sulfatase                                     173.1    2.5e-49   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF00884.13.fs   1/1      60   419 ..     1   405 []   173.1  2.5e-49
PF00884.13.ls   1/1      60   419 ..     1   405 []   174.8  1.9e-49

Alignments of top-scoring domains:
PF00884.13.fs: domain 1 of 1, from 60 to 419: score 173.1, E = 2.5e-49
                   *->kppNvvlilgESfradrrlpnmglyGyprpttPfLsdklaqdeegll
                       +pN+v+il+++++++    ++g++  +  +t +L dk+a   eg++
    KIAA1001    60    QKPNFVIILADDMGWG----DLGANWAETKDTANL-DKMA--SEGMR 99   

                   FsnfysgapgTapSlfalLtglppsnlgvtvstpyqqgykspgydiqlpr
                   F +f+++a  ++pS+++lLtg+  ++ gvt++  ++ +       ++lp+
    KIAA1001   100 FVDFHAAASTCSPSRASLLTGRLGLRNGVTRNFAVTSV-------GGLPL 142  

                   tepnlpdlLkqaGYrTgfigkwhlswysrqtvykgkkts.FlPtnlGFdk
                    e++l+++L+qaGY Tg igkwhl++             +++P  +GFd+
    KIAA1001   143 NETTLAEVLQQAGYVTGIIGKWHLGHH-----------GsYHPNFRGFDY 181  

                   figrnalsdlyanpsdseynl.g...........................
                   ++g +++s ++   + ++yn+++ +  +++++++++ +++  ++   +  
    KIAA1001   182 YFG-IPYSHDMGCTDTPGYNHpPcpacpqgdgpsrnlqrdcytdvalply 230  

                   ...........ggvsDealldkaldlLalqkn.dkPfFivlhtlgsHaig
                   ++ +  +++ +   + ++ ++ka ++++ ++ +++Pf++++++ + H   
    KIAA1001   231 enlniveqpvnLSSLAQKYAEKATQFIQRASTsGRPFLLYVALAHMHV-- 278  

                   ppiPyypdrypekfatfqptceekerscskerqslnnYlnavaytDdlig
                   p+  + ++  ++                    + ++ Y   + ++D l+g
    KIAA1001   279 PL--PVTQLPAAP-------------------RGRSLYGAGLWEMDSLVG 307  

                   rvlekLeksglldnTlvvytSDHGpslget.............ggggylr
                   ++ +k+ ++ +++nT++ +t+D+Gp    ++  ++ ++ ++       + 
    KIAA1001   308 QIKDKV-DHTVKENTFLWFTGDNGPWAQKCelagsvgpftgfwQTRQGGS 356  

                   ggktnayeggyrvPlliwspggkakkhpedvqcikgqknkalvscihvDl
                   + k++++egg+rvP+l ++pg  +           + ++ al s  + D+
    KIAA1001   357 PAKQTTWEGGHRVPALAYWPGRVPV----------NVTSTALLS--VLDI 394  

                   fpTiLdlaGik.kt.idvplyyadltpppsnpqagpkdllldgrdtlail
                   fpT+ +la +  +++                                   
    KIAA1001   395 FPTVVALAQASlPQgR---------------------------------- 410  

                   egYdltadpgelen<-*
                        ++d+ ++ +   
    KIAA1001   411 -----RFDGVDVSE    419  

PF00884.13.ls: domain 1 of 1, from 60 to 419: score 174.8, E = 1.9e-49
                   *->kppNvvlilgESfradrrlpnmglyGyprpttPfLsdklaqdeegll
                       +pN+v+il+++++++    ++g++  +  +t +L dk+a   eg++
    KIAA1001    60    QKPNFVIILADDMGWG----DLGANWAETKDTANL-DKMA--SEGMR 99   

                   FsnfysgapgTapSlfalLtglppsnlgvtvstpyqqgykspgydiqlpr
                   F +f+++a  ++pS+++lLtg+  ++ gvt++  ++ +       ++lp+
    KIAA1001   100 FVDFHAAASTCSPSRASLLTGRLGLRNGVTRNFAVTSV-------GGLPL 142  

                   tepnlpdlLkqaGYrTgfigkwhlswysrqtvykgkkts.FlPtnlGFdk
                    e++l+++L+qaGY Tg igkwhl++             +++P  +GFd+
    KIAA1001   143 NETTLAEVLQQAGYVTGIIGKWHLGHH-----------GsYHPNFRGFDY 181  

                   figrnalsdlyanpsdseynl.g...........................
                   ++g +++s ++   + ++yn+++ +  +++++++++ +++  ++   +  
    KIAA1001   182 YFG-IPYSHDMGCTDTPGYNHpPcpacpqgdgpsrnlqrdcytdvalply 230  

                   ...........ggvsDealldkaldlLalqkn.dkPfFivlhtlgsHaig
                   ++ +  +++ +   + ++ ++ka ++++ ++ +++Pf++++++ + H   
    KIAA1001   231 enlniveqpvnLSSLAQKYAEKATQFIQRASTsGRPFLLYVALAHMHV-- 278  

                   ppiPyypdrypekfatfqptceekerscskerqslnnYlnavaytDdlig
                   p+  + ++  ++                    + ++ Y   + ++D l+g
    KIAA1001   279 PL--PVTQLPAAP-------------------RGRSLYGAGLWEMDSLVG 307  

                   rvlekLeksglldnTlvvytSDHGpslget.............ggggylr
                   ++ +k+ ++ +++nT++ +t+D+Gp    ++  ++ ++ ++       + 
    KIAA1001   308 QIKDKV-DHTVKENTFLWFTGDNGPWAQKCelagsvgpftgfwQTRQGGS 356  

                   ggktnayeggyrvPlliwspggkakkhpedvqcikgqknkalvscihvDl
                   + k++++egg+rvP+l ++pg  +           + ++ al s  + D+
    KIAA1001   357 PAKQTTWEGGHRVPALAYWPGRVPV----------NVTSTALLS--VLDI 394  

                   fpTiLdlaGik.kt.idvplyyadltpppsnpqagpkdllldgrdtlail
                   fpT+ +la +  +++                                   
    KIAA1001   395 FPTVVALAQASlPQgR---------------------------------- 410  

                   egYdltadpgelen<-*
                        ++d+ ++ +   
    KIAA1001   411 -----RFDGVDVSE    419  

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