hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14404977/chunk_1/iprscan-20080501-14404977.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1005
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       22.6    3.6e-06   1
PF00168.20.ls C2 domain                                       24.5    0.00034   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/1     612   701 ..     1    88 []    22.6  3.6e-06
PF00168.20.ls   1/1     612   701 ..     1    88 []    24.5  0.00034

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 1, from 612 to 701: score 22.6, E = 3.6e-06
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      L++t+ ++++L  +  +   + PYV+ ++ +      + T +i+++ 
    KIAA1005   612    LHITIRCCNHLQSRA-SHLQPHPYVVYKFFDFAD---HDTAIIPSSN 654  

                   NPvWNEtFtFevpppdlqe......tLeieVyDydrfgrddflGevs<-*
                   +P+++ +++F+vp +   ++  ++++L + V+D+     +  +G+v+   
    KIAA1005   655 DPQFDDHMYFPVPMNMDLDrylkseSLSFYVFDDSDTQENIYIGKVN    701  

PF00168.20.ls: domain 1 of 1, from 612 to 701: score 24.5, E = 0.00034
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      L++t+ ++++L  +  +   + PYV+ ++ +      + T +i+++ 
    KIAA1005   612    LHITIRCCNHLQSRA-SHLQPHPYVVYKFFDFAD---HDTAIIPSSN 654  

                   NPvWNEtFtFevpppdlqe......tLeieVyDydrfgrddflGevs<-*
                   +P+++ +++F+vp +   ++  ++++L + V+D+     +  +G+v+   
    KIAA1005   655 DPQFDDHMYFPVPMNMDLDrylkseSLSFYVFDDSDTQENIYIGKVN    701  

//