hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14491847/chunk_1/iprscan-20080501-14491847.nocrc
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Query sequence: KIAA1010
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00721                                                 222.7    3.2e-62   1
SM00325                                                 135.6    5.3e-36   1
SM00326                                                  84.7    1.1e-20   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/3       1    39 [.     1    58 []    13.4     0.36
SM00325    1/1     526   704 ..     1   211 []   135.6  5.3e-36
SM00721    1/1     734   948 ..     1   260 []   222.7  3.2e-62
SM00326    2/3    1026  1085 ..     1    58 []    10.3     0.73
SM00326    3/3    1254  1313 ..     1    58 []    61.0  1.6e-13

Alignments of top-scoring domains:
SM00326: domain 1 of 3, from 1 to 39: score 13.4, E = 0.36
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                                        F+ GD+i++l   +dgW+eG l+  G++G
    KIAA1010     1    -----------------DFEVGDKIRILATLEDGWLEGSLK--GRTG 28   

                   lfPsnYVeeie<-*
                   +fP  +V++++   
    KIAA1010    29 IFPYRFVKLCP    39   

SM00325: domain 1 of 1, from 526 to 704: score 135.6, E = 5.3e-36
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      v+ ELlqTEr+Y+rdL++++e  + p+++ +       +++ +++ l
    KIAA1010   526    VIEELLQTERDYIRDLEMCIERIMVPMQQAQ-------VPNIDFEGL 565  

                   FgpNieeiyefHrrFLdeLeerveewllskdlKsernsviedsgerigdv
                   Fg N++ ++++++++L++Le                        + +g v
    KIAA1010   566 FG-NMQMVIKVSKQLLAALEIS----------------------DAVGPV 592  

                   FlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkei...
                   Fl++  + e+  +Y+ Yc+nh++a++ll+  +  +k+++ qk+l+    +
    KIAA1010   593 FLGH--RDELEGTYKIYCQNHDEAIALLEI-Y--EKDEKIQKHLQDSlad 637  

                   eskpncr.sk.searltLeslLikPvQRltkYpLLLkellkhtppdhedr
                    ++ +++ + +      L s+LikPvQR+++YpLLL ell  tp++h+d+
    KIAA1010   638 LKSLYNEwGCtN--YINLGSFLIKPVQRVMRYPLLLMELLNSTPESHPDK 685  

                   edLkkAleaikelasqvNe<-*
                     L+ A+ a+ke+   +Ne   
    KIAA1010   686 VPLTNAVLAVKEINVNINE    704  

SM00721: domain 1 of 1, from 734 to 948: score 222.7, E = 3.2e-62
                   *->glkKaAffnRakqkvgeKvGkaekTkvLDedFeelerrfdtteaete
                      ++ K+  +nR+++++++++G+a + k  De+Fee e++f+++e++++
    KIAA1010   734    SIIKK--SNRVSSHLKHLTGFAPQIK--DEVFEETEKNFRMQERLIK 776  

                   klqkdtkeylQpnr..palraklasqkklskslgevyeggyPqaeelLae
                   + ++d+++ylQ++r+++++++  a+++  +++++e+++            
    KIAA1010   777 SFIRDLSLYLQHIResACVKVVAAVSM--WDVCMERGHR----------- 813  

                   amidageglgadsslygkaldklgealkkllqakeslddqvkqtfilpll
                       + e+++  +  y  + d+l  ++k+  +           +++  +l
    KIAA1010   814 ----DLEQFERVHR-Y--ISDQLFTNFKERTE-----------RLVISPL 845  

                   nfllkefkeikkarkKlerkrLDyDsartklkkakkkkekkkkdeaklak
                   n+ll++f+ ++k ++K+ +k+LD++ +    ++a+k+k+kk         
    KIAA1010   846 NQLLSMFTGPHKLVQKRFDKLLDFYNCT---ERAEKLKDKK--------- 883  

                   aeEelreAkqefEelneqLveeLpqlidsrvdffvnslqalieaqlryhr
                   + Eel+ A++ +E+ln+qL++eLp+++++++++f n+++ ++ea++++ +
    KIAA1010   884 TLEELQSARNNYEALNAQLLDELPKFHQYAQGLFTNCVHGYAEAHCDFVH 933  

                   esykllqqlqqqldk<-*
                   ++++ l+ l++ l+    
    KIAA1010   934 QALEQLKPLLSLLKV    948  

SM00326: domain 2 of 3, from 1026 to 1085: score 10.3, E = 0.73
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks....ddgWweGelnrt
                      + ++A  +++a ++ + s+ +GD + v++k ++ ++++ w   ++  
    KIAA1010  1026    KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKdpmgSQNRWLIDNG-- 1070 

                   GkeGlfPsnYVeeie<-*
                     +G++ s+++++++   
    KIAA1010  1071 VTKGFVYSSFLKPYN    1085 

SM00326: domain 3 of 3, from 1254 to 1313: score 61.0, E = 1.6e-13
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks....ddgWweGelnrt
                      +++ A+Y ++a+n++ELs+++++++ +le  + +++ +Ww +e+n  
    KIAA1010  1254    QVYFAVYTFKARNPNELSVSANQKLKILEFKdvtgNTEWWLAEVN-- 1298 

                   GkeGlfPsnYVeeie<-*
                   Gk+G++PsnY+++ e   
    KIAA1010  1299 GKKGYVPSNYIRKTE    1313 

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