hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14553994/chunk_1/iprscan-20080501-14553994.nocrc
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Query sequence: KIAA1013
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00295                                                 140.8    1.5e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00295    1/1      83   288 ..     1   232 []   140.8  1.5e-37

Alignments of top-scoring domains:
SM00295: domain 1 of 1, from 83 to 288: score 140.8, E = 1.5e-37
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                        + r++ V+lld+  le+ v+++  a+ell+ v+ +++l  +e+ey
    KIAA1013    83    MTEGRHCQVHLLDDRRLELLVQPKLLARELLDLVASHFNL--KEKEY 127  

                   FgLqfedkdedshWldpaktilkqdvkspksepltlyFRvkFyppdwhgp
                   Fg+ f+d+++++ Wl+++  +l++d    k++p  l+F v+Fy++     
    KIAA1013   128 FGITFIDDTGQQNWLQLDHRVLDHDLP-KKPGPTILHFAVRFYIES---- 172  

                   peqlkeDptrynllylQvrddilsGrlpcpseeeallLAaLalqaefGdy
                     ++  D+t+ +l++l ++  + +G + ++  e+ + LAa++lq   Gdy
    KIAA1013   173 -ISFLKDKTTVELFFLNAKACVHKGQIEVE-SETIFKLAAFILQEAKGDY 220  

                   dpeeeekkkslkhvakelslkrflPkqlldsikasflqiqltlkewrerI
                    + e+        +   + l+ f  k          lq++ +l + ++r+
    KIAA1013   221 TSDEN-------ARKDLKTLPAFPTKT---------LQEHPSLAYCEDRV 254  

                   velhkehaglspeeaklkYLelarrLpptYGvelF<-*
                    e + +++gl++ +a ++Y+++++ Lp tYGv+++   
    KIAA1013   255 IEHYLKIKGLTRGQAVVQYMKIVEALP-TYGVHYY    288  

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