hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14572146/chunk_1/iprscan-20080501-14572146.nocrc
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Query sequence: KIAA1014
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00397.16.ls WW domain                                       59.1    1.3e-14   2
PF00397.16.fs WW domain                                       53.6      5e-14   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00397.16.ls   1/2     249   279 ..     1    30 []    26.5  8.5e-05
PF00397.16.fs   1/2     253   279 ..     5    30 .]    23.0  1.8e-05
PF00397.16.fs   2/2     630   660 ..     1    30 []    30.6  1.4e-07
PF00397.16.ls   2/2     630   660 ..     1    30 []    32.6  1.3e-06

Alignments of top-scoring domains:
PF00397.16.ls: domain 1 of 2, from 249 to 279: score 26.5, E = 8.5e-05
                   *->lppgWeertd.pdGrpYYyNhnTktTqWekP<-*
                          W e++d+  G +YY+N++T++ +We P   
    KIAA1014   249    EMGDWQEVWDeNTGCYYYWNTQTNEVTWELP    279  

PF00397.16.fs: domain 1 of 2, from 253 to 279: score 23.0, E = 1.8e-05
                   *->Weertd.pdGrpYYyNhnTktTqWekP<-*
                      W e++d+  G +YY+N++T++ +We P   
    KIAA1014   253    WQEVWDeNTGCYYYWNTQTNEVTWELP    279  

PF00397.16.fs: domain 2 of 2, from 630 to 660: score 30.6, E = 1.4e-07
                   *->lppgWeertd.pdGrpYYyNhnTktTqWekP<-*
                       p gW  ++d+++ r++Y+N +++++qWe P   
    KIAA1014   630    TPKGWSCHWDrDHRRYFYVNEQSGESQWEFP    660  

PF00397.16.ls: domain 2 of 2, from 630 to 660: score 32.6, E = 1.3e-06
                   *->lppgWeertd.pdGrpYYyNhnTktTqWekP<-*
                       p gW  ++d+++ r++Y+N +++++qWe P   
    KIAA1014   630    TPKGWSCHWDrDHRRYFYVNEQSGESQWEFP    660  

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