hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14572146/chunk_1/iprscan-20080501-14572146.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1014
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00456                                                  79.3    4.8e-19   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00456    1/2     248   281 ..     1    34 []    32.5  5.9e-05
SM00456    2/2     629   662 ..     1    34 []    46.8  2.9e-09

Alignments of top-scoring domains:
SM00456: domain 1 of 2, from 248 to 281: score 32.5, E = 5.9e-05
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                         + W e++d+++G +YY+N++T e +We P+    
    KIAA1014   248    IEMGDWQEVWDENTGCYYYWNTQTNEVTWELPQY    281  

SM00456: domain 2 of 2, from 629 to 662: score 46.8, E = 2.9e-09
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                        P gW +++d+d+ r++Y+N +++e+qWe P++   
    KIAA1014   629    ATPKGWSCHWDRDHRRYFYVNEQSGESQWEFPDG    662  

//