hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15124991/chunk_1/iprscan-20080501-15124991.nocrc
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Query sequence: KIAA1023
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00015                                                  34.2    1.8e-05   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00015    1/2     512   534 ..     1    23 []    20.2     0.29
SM00015    2/2     571   593 ..     1    23 []    14.0      9.2

Alignments of top-scoring domains:
SM00015: domain 1 of 2, from 512 to 534: score 20.2, E = 0.29
                   *->rleraAiiIQaawRGylaRkryk<-*
                       l +aA+++Qaa+RG+l R +     
    KIAA1023   512    VLDEAAVVLQAAFRGHLTRTKLL    534  

SM00015: domain 2 of 2, from 571 to 593: score 14.0, E = 9.2
                   *->rleraAiiIQaawRGylaRkryk<-*
                       +e+a++iIQ+a R +laR r     
    KIAA1023   571    VQEEAIVIIQSALRAHLARARHS    593  

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