hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15192250/chunk_1/iprscan-20080501-15192250.nocrc
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Query sequence: KIAA1027
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00307                                                 364.5   6.6e-105   1
SM00295                                                 256.3    2.5e-72   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00295    1/1      91   322 ..     1   232 []   256.3  2.5e-72
SM00307    1/1    2345  2542 ..     1   207 []   364.5 6.6e-105

Alignments of top-scoring domains:
SM00295: domain 1 of 1, from 91 to 322: score 256.3, E = 2.5e-72
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                      ++k+r lk+++ldgt++++ vd s t+ ++l+t+c ++g+  +++++
    KIAA1027    91    RKKQRPLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGI--TNHDE 135  

                   FgLqfedkded.................................shWldp
                   ++L++e + e++++ +++ +++++  +++++ ++ +++ +++++  Wld+
    KIAA1027   136 YSLVRELMEEKkeeitgtlrkdktllrdekkmeklkqklhtddeLNWLDH 185  

                   aktilkqdvkspksepltlyFRvkFyppdwhgppeqlkeDptrynllylQ
                    +t+++q+v+    e++tl++R+kF+++d    +++ ++Dp+++nlly+Q
    KIAA1027   186 GRTLREQGVE----EHETLLLRRKFFYSD----QNVDSRDPVQLNLLYVQ 227  

                   vrddilsGrlpcpseeeallLAaLalqaefGdydpeeeekkkslkhvake
                   +rddil+G +p++ +++a ++A +++q++fG ++++        kh+a++
    KIAA1027   228 ARDDILNGSHPVS-FDKACEFAGFQCQIQFGPHNEQ--------KHKAGF 268  

                   lslkrflPkqlldsikasflqiqltlkewrerIvelhkehaglspeeakl
                   l+lk+flPk + +             ++ +++I+++hk++ ++s+ eak+
    KIAA1027   269 LDLKDFLPKEYVK-------------QKGERKIFQAHKNCGQMSEIEAKV 305  

                   kYLelarrLpptYGvelF<-*
                   +Y++lar+L  tYGv +F   
    KIAA1027   306 RYVKLARSLK-TYGVSFF    322  

SM00307: domain 1 of 1, from 2345 to 2542: score 364.5, E = 6.6e-105
                   *->gveleVdEsILeaAkaItkAiaaLVkAAtnaQrEIVaqGrggaspae
                      +++l+++E+ILeaAk+I++A++aLVkAA++aQrE+VaqG++ga+pa+
    KIAA1027  2345    DESLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIPAN 2391 

                   fYkKnsrWTEGLISAAKAVAaAtnvLveaAdgvvqGkgseEeLIVAakeV
                   +++ +++W++GLISAA++VAaAtn+L+eaA+++vqG++s+E+LI++ak+V
    KIAA1027  2392 ALD-DGQWSQGLISAARMVAAATNNLCEAANAAVQGHASQEKLISSAKQV 2440 

                   AASTAQLVaASRVKAdkdSqSqAaqdrLeaAskaVtnAtanLVaavksva
                   AASTAQL++A++VKAd+dS+   a++rL+aA++aV++A++nLV+a++++a
    KIAA1027  2441 AASTAQLLVACKVKADQDSE---AMKRLQAAGNAVKRASDNLVKAAQKAA 2487 

                   ieddeetieqeqelDfskLslhegKtqEMEqQVeILKLEkeLeaARkkLa
                   ++     +eqe+e++++k+++++g++q++++Q+e+L++E+eLe+ARkkLa
    KIAA1027  2488 AF-----EEQENETVVVKEKMVGGIAQIIAAQEEMLRKERELEEARKKLA 2532 

                   eiRKqeYkla<-*
                   +iR+q+Yk+    
    KIAA1027  2533 QIRQQQYKFL    2542 

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