hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-15281682/chunk_1/iprscan-20080501-15281682.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1032 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF06292.8.ls Domain of Unknown Function (DUF1041) 330.2 3.3e-96 2 PF06292.8.fs Domain of Unknown Function (DUF1041) 326.5 4.3e-95 2 PF00168.20.fs C2 domain 197.0 5.3e-58 3 PF00168.20.ls C2 domain 202.8 7.6e-58 3 PF00130.12.fs Phorbol esters/diacylglycerol binding domain 64.7 2.8e-17 1 PF00130.12.ls Phorbol esters/diacylglycerol binding domain 66.6 7.2e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00168.20.ls 1/3 3 78 .. 1 88 [] 36.1 1.1e-07 PF00168.20.fs 1/3 3 78 .. 1 88 [] 34.2 1.2e-09 PF00130.12.fs 1/1 553 605 .. 1 55 [] 64.7 2.8e-17 PF00130.12.ls 1/1 553 605 .. 1 55 [] 66.6 7.2e-17 PF00168.20.ls 2/3 677 768 .. 1 88 [] 109.8 7.5e-30 PF00168.20.fs 2/3 677 768 .. 1 88 [] 107.8 1.6e-31 PF06292.8.ls 1/2 992 1101 .. 1 121 [] 170.8 3.1e-48 PF06292.8.fs 1/2 992 1101 .. 1 121 [] 168.9 1.2e-47 PF06292.8.ls 2/2 1222 1314 .. 1 121 [] 159.4 8.8e-45 PF06292.8.fs 2/2 1222 1314 .. 1 121 [] 157.6 3e-44 PF00168.20.fs 3/3 1546 1636 .. 1 88 [] 54.9 9.1e-16 PF00168.20.ls 3/3 1546 1636 .. 1 88 [] 56.9 6.3e-14 Alignments of top-scoring domains: PF00168.20.ls: domain 1 of 3, from 3 to 78: score 36.1, E = 1.1e-07 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl L V v++Ak + k ++YV++++ + +k T ++ + + KIAA1032 3 LCVGVKKAKFDGA----QEKFNTYVTLKVQN-----VKSTTIAVRGS 40 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* P W+++F+Fe L++eV++++ ++ d +G+v KIAA1032 41 QPSWEQDFMFE-INRLDLG-LTVEVWNKGLIW-DTMVGTVW 78 PF00168.20.fs: domain 1 of 3, from 3 to 78: score 34.2, E = 1.2e-09 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl L V v++Ak + k ++YV++++ + +k T ++ + + KIAA1032 3 LCVGVKKAKFDGA----QEKFNTYVTLKVQN-----VKSTTIAVRGS 40 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* P W+++F+Fe L++eV++++ ++ d +G+v KIAA1032 41 QPSWEQDFMFE-INRLDLG-LTVEVWNKGLIW-DTMVGTVW 78 PF00130.12.fs: domain 1 of 1, from 553 to 605: score 64.7, E = 2.8e-17 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F++ t pt+C C+ +lwg +++qG++C++C++++H++C+ + KIAA1032 553 HNFEVW-TATTPTYCYECEGLLWG-IARQGMRCTECGVKCHEKCQDL 597 VppeCgcg<-* +++ C KIAA1032 598 LNADCLQR 605 PF00130.12.ls: domain 1 of 1, from 553 to 605: score 66.6, E = 7.2e-17 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F++ t pt+C C+ +lwg +++qG++C++C++++H++C+ + KIAA1032 553 HNFEVW-TATTPTYCYECEGLLWG-IARQGMRCTECGVKCHEKCQDL 597 VppeCgcg<-* +++ C KIAA1032 598 LNADCLQR 605 PF00168.20.ls: domain 2 of 3, from 677 to 768: score 109.8, E = 7.5e-30 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +++tv++A++L +kD k+g+sDPYV+v++g+ +kk+Tk+i ++l KIAA1032 677 ISITVVCAQGLQAKD-KTGSSDPYVTVQVGK----TKKRTKTIYGNL 718 NPvWNEtFtFevpppdlqetLeieVyDydrfgr...........ddflGe NPvW+E F+Fe +++ ++ +++ V+D+d + +++ +++ ++++ddflG+ KIAA1032 719 NPVWEENFHFE-CHNSSDR-IKVRVWDEDDDIKsrvkqrfkresDDFLGQ 766 vs<-* ++ KIAA1032 767 TI 768 PF00168.20.fs: domain 2 of 3, from 677 to 768: score 107.8, E = 1.6e-31 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +++tv++A++L +kD k+g+sDPYV+v++g+ +kk+Tk+i ++l KIAA1032 677 ISITVVCAQGLQAKD-KTGSSDPYVTVQVGK----TKKRTKTIYGNL 718 NPvWNEtFtFevpppdlqetLeieVyDydrfgr...........ddflGe NPvW+E F+Fe +++ ++ +++ V+D+d + +++ +++ ++++ddflG+ KIAA1032 719 NPVWEENFHFE-CHNSSDR-IKVRVWDEDDDIKsrvkqrfkresDDFLGQ 766 vs<-* ++ KIAA1032 767 TI 768 PF06292.8.ls: domain 1 of 2, from 992 to 1101: score 170.8, E = 3.1e-48 *->ktvvkdclkaaarvwydfifenckieerm.fqvdqpgaqrvPRvpCI ++vvkdc+ka+++++y++if+nc++++++++q d+ ++ +vP KIAA1032 992 SQVVKDCVKACLNSTYEYIFNNCHELYSReYQTDPAKKGEVPP---- 1034 LMNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqel +++++ k+l+++ kLi+l++s+++e+++++++ LnqFpqel KIAA1032 1035 ------EEQGPSIKNLDFW--SKLITLIVSIIEEDKNSYTPCLNQFPQEL 1076 nlgkesAedlwslfavdldsaleEq<-* n+gk+sAe +w lfa+d+++a eE+ KIAA1032 1077 NVGKISAEVMWNLFAQDMKYAMEEH 1101 PF06292.8.fs: domain 1 of 2, from 992 to 1101: score 168.9, E = 1.2e-47 *->ktvvkdclkaaarvwydfifenckieerm.fqvdqpgaqrvPRvpCI ++vvkdc+ka+++++y++if+nc++++++++q d+ ++ +vP KIAA1032 992 SQVVKDCVKACLNSTYEYIFNNCHELYSReYQTDPAKKGEVPP---- 1034 LMNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqel +++++ k+l+++ kLi+l++s+++e+++++++ LnqFpqel KIAA1032 1035 ------EEQGPSIKNLDFW--SKLITLIVSIIEEDKNSYTPCLNQFPQEL 1076 nlgkesAedlwslfavdldsaleEq<-* n+gk+sAe +w lfa+d+++a eE+ KIAA1032 1077 NVGKISAEVMWNLFAQDMKYAMEEH 1101 PF06292.8.ls: domain 2 of 2, from 1222 to 1314: score 159.4, E = 8.8e-45 *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL kt+ +++l++a+++++df ++++k++e+ vpCIL KIAA1032 1222 KTISNVLLQYADIISKDFASYCSKEKEK--------------VPCIL 1254 MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln MNN+Qqlrvqlek++e+mGG++L+++++++Lkelq+kln+vL+ KIAA1032 1255 MNNTQQLRVQLEKMFEAMGGKELDAEASDILKELQVKLNNVLD------- 1297 lgkesAedlwslfavdldsaleEq<-* +l+ +fa+++++++eE+ KIAA1032 1298 -------ELSRVFATSFQPHIEEC 1314 PF06292.8.fs: domain 2 of 2, from 1222 to 1314: score 157.6, E = 3e-44 *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL kt+ +++l++a+++++df ++++k++e+ vpCIL KIAA1032 1222 KTISNVLLQYADIISKDFASYCSKEKEK--------------VPCIL 1254 MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln MNN+Qqlrvqlek++e+mGG++L+++++++Lkelq+kln+vL+ KIAA1032 1255 MNNTQQLRVQLEKMFEAMGGKELDAEASDILKELQVKLNNVLD------- 1297 lgkesAedlwslfavdldsaleEq<-* +l+ +fa+++++++eE+ KIAA1032 1298 -------ELSRVFATSFQPHIEEC 1314 PF00168.20.fs: domain 3 of 3, from 1546 to 1636: score 54.9, E = 9.1e-16 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik ++V+v+ A++L+ + +g P+ +v + g ++k+++ Tk ++ KIAA1032 1546 VTVKVVAANDLKW-Q-TSGIFRPFIEVNIIGPQLSdKKrkFATKSKN 1590 ktlNPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* +++ P++NE+F+F+++ + + e +L++ V+Dy+ + d +G ++ KIAA1032 1591 NSWAPKYNESFQFTLSADAGPEcyELQVCVKDYCFAREDRTVGLAV 1636 PF00168.20.ls: domain 3 of 3, from 1546 to 1636: score 56.9, E = 6.3e-14 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik ++V+v+ A++L+ + +g P+ +v + g ++k+++ Tk ++ KIAA1032 1546 VTVKVVAANDLKW-Q-TSGIFRPFIEVNIIGPQLSdKKrkFATKSKN 1590 ktlNPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* +++ P++NE+F+F+++ + + e +L++ V+Dy+ + d +G ++ KIAA1032 1591 NSWAPKYNESFQFTLSADAGPEcyELQVCVKDYCFAREDRTVGLAV 1636 //