hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15332773/chunk_1/iprscan-20080501-15332773.nocrc
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Query sequence: KIAA1035
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00246.14.fs Zinc carboxypeptidase                      89.0      2e-25   1
PF00246.14.ls Zinc carboxypeptidase                      85.4    1.6e-22   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00246.14.fs   1/1     849  1023 ..     1   212 [.    89.0    2e-25
PF00246.14.ls   1/1     849  1127 ..     1   324 []    85.4  1.6e-22

Alignments of top-scoring domains:
PF00246.14.fs: domain 1 of 1, from 849 to 1023: score 89.0, E = 2e-25
                   *->ieawldela.aayPdlv..rlvsiGkSvEGRpllvlkiskg......
                      ++  l++l++a++P+ +  r+ ++  +  G++ ++++i+  ++++  
    KIAA1035   849    LQMHLQKLEsAHNPQQIyfRKDVLCETLSGNSCPLVTITAMpesnyy 895  

                   .....gpgkpavlidagiHarEwigpatalylineLlsnYgndpevtrLl
                   ++  + +++p v++ a++H++E+++++++ +++++L+s   n+p+++ L+
    KIAA1035   896 ehichFRNRPYVFLSARVHPGETNASWVMKGTLEYLMS---NNPTAQSLR 942  

                   dktdfyivPvvNPDGyeythttgrinqdgRgqgeslWRKnRsnantecgg
                   +++ f ivP++NPDG++ +++                   R++       
    KIAA1035   943 ESYIFKIVPMLNPDGVINGNH-------------------RCSLS----- 968  

                   ssCiGvDLNRNFpflWgevGpaSsnPcsetYrGpspfSePEtrAvadfir
                       G DLNR++          S +P   +           ++ + +++ 
    KIAA1035   969 ----GEDLNRQW---------QSPSPDLHPT-------IYHAKGLLQYLA 998  

                   svneeklgriklyidlHsysqliliYPYg<-*
                     +  k + + +y+d+H++s+  + + Yg   
    KIAA1035   999 A-V--K-RLPLVYCDYHGHSRKKNVFMYG    1023 

PF00246.14.ls: domain 1 of 1, from 849 to 1127: score 85.4, E = 1.6e-22
                   *->ieawldela.aayPdlv..rlvsiGkSvEGRpllvlkiskg......
                      ++  l++l++a++P+ +  r+ ++  +  G++ ++++i+  ++++  
    KIAA1035   849    LQMHLQKLEsAHNPQQIyfRKDVLCETLSGNSCPLVTITAMpesnyy 895  

                   .....gpgkpavlidagiHarEwigpatalylineLlsnYgndpevtrLl
                   ++  + +++p v++ a++H++E+++++++ +++++L+s   n+p+++ L+
    KIAA1035   896 ehichFRNRPYVFLSARVHPGETNASWVMKGTLEYLMS---NNPTAQSLR 942  

                   dktdfyivPvvNPDGyeythttgrinqdgRgqgeslWRKnRsnantecgg
                   +++ f ivP++NPDG++ +++                   R++       
    KIAA1035   943 ESYIFKIVPMLNPDGVINGNH-------------------RCSLS----- 968  

                   ssCiGvDLNRNFpflWgevGpaSsnPcsetYrGpspfSePEtrAvadfir
                       G DLNR++          S +P   +           ++ + +++ 
    KIAA1035   969 ----GEDLNRQW---------QSPSPDLHPT-------IYHAKGLLQYLA 998  

                   svneeklgriklyidlHsysqliliYPYg.............ytssgset
                     +  k + + +y+d+H++s+  + + Yg + +++  ++++++ts     
    KIAA1035   999 A-V--K-RLPLVYCDYHGHSRKKNVFMYGcsiketvwhtndnATSC---- 1040 

                   gyytssevenelppddee...lkelakaaakal.kmvyGtesdyftyGit
                             ++++d   ++  k l++ a+  + ++++     +  +  +
    KIAA1035  1041 ----------DVVEDTGYrtlPKILSHIAPAFCmSSCS-----F-VVEKS 1074 

                   ngdtliYpasGgsdDWaygelgikysyTlELrdtgnsw...yGFllpasq
                      t        +   +++e g++ syT+E   +g + ++  G ++ +++
    KIAA1035  1075 KEST--------ARVVVWREIGVQRSYTMESTLCGCDQgkyKGLQIGTRE 1116 

                   iiptgeetlea<-*
                   ++++g+  + +   
    KIAA1035  1117 LEEMGAKFCVG    1127 

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