hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16035822/chunk_1/iprscan-20080501-16035822.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1053
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                  38.1    1.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00454    1/1     110   173 ..     1    67 []    38.1  1.2e-06

Alignments of top-scoring domains:
SM00454: domain 1 of 1, from 110 to 173: score 38.1, E = 1.2e-06
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                        + +  +V +WL+s++l++Ya  F++  +  ee+ +lt e  L+  
    KIAA1053   110    IGtSTSTNVPAWLKSLRLHKYAALFSQMTY--EEMMALT-ECQLEAQ 153  

                   GitllGhRkkIlsaiqklkeq<-*
                    +   G+R+kI  +iqklke+   
    KIAA1053   154 NV-TKGARHKIVISIQKLKER    173  

//