# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh05240.fasta.nr -Q ../query/KIAA1054.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1054, 480 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7819903 sequences Expectation_n fit: rho(ln(x))= 4.6977+/-0.00019; mu= 13.1489+/- 0.011 mean_var=72.0088+/-14.715, 0's: 42 Z-trim: 82 B-trim: 5353 in 2/65 Lambda= 0.151141 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|108860965|sp|Q496J9.1|SV2C_HUMAN RecName: Full= ( 727) 3270 722.7 7.9e-206 gi|119616178|gb|EAW95772.1| synaptic vesicle glyco ( 727) 3261 720.7 3.1e-205 gi|71680885|gb|AAI00825.1| Synaptic vesicle glycop ( 727) 3259 720.3 4.2e-205 gi|114599589|ref|XP_526889.2| PREDICTED: synaptic ( 727) 3234 714.8 1.8e-203 gi|109077644|ref|XP_001105846.1| PREDICTED: simila ( 727) 3230 713.9 3.3e-203 gi|108860966|sp|Q69ZS6.2|SV2C_MOUSE RecName: Full= ( 727) 3192 705.6 1e-200 gi|148668577|gb|EDL00896.1| mCG114899 [Mus musculu ( 727) 3192 705.6 1e-200 gi|81872902|sp|Q9Z2I6.1|SV2C_RAT RecName: Full=Syn ( 727) 3191 705.4 1.2e-200 gi|82952102|ref|XP_928128.1| PREDICTED: similar to ( 730) 3097 684.9 1.8e-194 gi|126320613|ref|XP_001363864.1| PREDICTED: simila ( 727) 3093 684.1 3.3e-194 gi|149726531|ref|XP_001504722.1| PREDICTED: simila ( 725) 3089 683.2 6e-194 gi|73952197|ref|XP_546060.2| PREDICTED: similar to ( 724) 3052 675.1 1.6e-191 gi|149408453|ref|XP_001512690.1| PREDICTED: simila ( 727) 3015 667.0 4.3e-189 gi|76626429|ref|XP_580279.2| PREDICTED: similar to ( 725) 2950 652.9 7.9e-185 gi|118103906|ref|XP_429151.2| PREDICTED: similar t ( 727) 2924 647.2 4.1e-183 gi|193787750|dbj|BAG52953.1| unnamed protein produ ( 676) 2891 640.0 5.6e-181 gi|114599587|ref|XP_001146480.1| PREDICTED: synapt ( 676) 2876 636.7 5.4e-180 gi|124297356|gb|AAI32112.1| Sv2c protein [Mus musc ( 667) 2834 627.5 3.1e-177 gi|472817|gb|AAA49235.1| transmembrane transporter ( 724) 2755 610.4 5e-172 gi|47226719|emb|CAG07878.1| unnamed protein produc ( 734) 2524 560.0 7.4e-157 gi|74205849|dbj|BAE23219.1| unnamed protein produc ( 358) 2388 530.0 3.7e-148 gi|123233133|emb|CAM15216.1| novel protein similar ( 745) 2225 494.8 3.1e-137 gi|118095871|ref|XP_425081.2| PREDICTED: hypotheti ( 705) 2183 485.6 1.7e-134 gi|149637510|ref|XP_001508236.1| PREDICTED: hypoth ( 685) 2159 480.4 6.4e-133 gi|158256868|dbj|BAF84407.1| unnamed protein produ ( 742) 2131 474.3 4.6e-131 gi|81881914|sp|Q9JIS5.1|SV2A_MOUSE RecName: Full=S ( 742) 2129 473.9 6.3e-131 gi|108935908|sp|Q02563.2|SV2A_RAT RecName: Full=Sy ( 742) 2129 473.9 6.3e-131 gi|149751196|ref|XP_001488634.1| PREDICTED: simila ( 742) 2127 473.4 8.5e-131 gi|194036298|ref|XP_001926797.1| PREDICTED: simila ( 742) 2126 473.2 9.9e-131 gi|75040980|sp|Q5R4L9.1|SV2A_PONAB RecName: Full=S ( 742) 2126 473.2 9.9e-131 gi|31873707|emb|CAD97824.1| hypothetical protein [ ( 742) 2126 473.2 9.9e-131 gi|38014333|gb|AAH00776.2| SV2A protein [Homo sapi ( 604) 2125 472.9 9.9e-131 gi|74749878|sp|Q7L0J3.1|SV2A_HUMAN RecName: Full=S ( 742) 2125 473.0 1.1e-130 gi|114559188|ref|XP_001166661.1| PREDICTED: synapt ( 742) 2124 472.8 1.3e-130 gi|126313658|ref|XP_001365401.1| PREDICTED: simila ( 742) 2123 472.6 1.6e-130 gi|75039741|sp|Q29397.1|SV2A_BOVIN RecName: Full=S ( 742) 2121 472.1 2.1e-130 gi|125840569|ref|XP_696434.2| PREDICTED: similar t ( 733) 2117 471.2 3.8e-130 gi|194038384|ref|XP_001926800.1| PREDICTED: simila ( 543) 2115 470.7 4.2e-130 gi|383109|prf||1902226A transporter-like protein p ( 742) 2116 471.0 4.5e-130 gi|117645976|emb|CAL38455.1| hypothetical protein ( 742) 2115 470.8 5.2e-130 gi|194206321|ref|XP_001499973.2| PREDICTED: simila ( 683) 2114 470.6 5.7e-130 gi|207092|gb|AAA42188.1| synaptic vesicle protein ( 742) 2114 470.6 6.1e-130 gi|73951382|ref|XP_545841.2| PREDICTED: similar to ( 713) 2111 469.9 9.3e-130 gi|133777504|gb|AAI23426.1| SV2B protein [Bos taur ( 683) 2109 469.5 1.2e-129 gi|75075844|sp|Q4R4X3.1|SV2A_MACFA RecName: Full=S ( 742) 2107 469.1 1.7e-129 gi|194378880|dbj|BAG57991.1| unnamed protein produ ( 532) 2100 467.4 4e-129 gi|74738530|sp|Q7L1I2.1|SV2B_HUMAN RecName: Full=S ( 683) 2100 467.5 4.7e-129 gi|149057207|gb|EDM08530.1| synaptic vesicle glyco ( 683) 2099 467.3 5.5e-129 gi|81872130|sp|Q63564.1|SV2B_RAT RecName: Full=Syn ( 683) 2099 467.3 5.5e-129 gi|48146289|emb|CAG33367.1| SV2B [Homo sapiens] ( 683) 2095 466.4 1e-128 >>gi|108860965|sp|Q496J9.1|SV2C_HUMAN RecName: Full=Syna (727 aa) initn: 3270 init1: 3270 opt: 3270 Z-score: 3851.5 bits: 722.7 E(): 7.9e-206 Smith-Waterman score: 3270; 100.000% identity (100.000% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|108 KQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM :::::::::::::::::::::::::::::: gi|108 SIPILLASTVLVCGGLVGLCLPDTRTQVLM 700 710 720 >>gi|119616178|gb|EAW95772.1| synaptic vesicle glycoprot (727 aa) initn: 3261 init1: 3261 opt: 3261 Z-score: 3840.9 bits: 720.7 E(): 3.1e-205 Smith-Waterman score: 3261; 99.583% identity (100.000% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|119 KQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 IKPLQSDEYALLTRNVERDKYANFSINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|119 KSCTFEDVTSVNTYFKNCTFIDTVFNNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM :::::::::::::::::::::::::::::: gi|119 SIPILLASTVLVCGGLVGLCLPDTRTQVLM 700 710 720 >>gi|71680885|gb|AAI00825.1| Synaptic vesicle glycoprote (727 aa) initn: 3259 init1: 3259 opt: 3259 Z-score: 3838.6 bits: 720.3 E(): 4.2e-205 Smith-Waterman score: 3259; 99.792% identity (99.792% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|716 KQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 TFMPESPRSLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM :::::::::::::::::::::::::::::: gi|716 SIPILLASTVLVCGGLVGLCLPDTRTQVLM 700 710 720 >>gi|114599589|ref|XP_526889.2| PREDICTED: synaptic vesi (727 aa) initn: 3234 init1: 3234 opt: 3234 Z-score: 3809.1 bits: 714.8 E(): 1.8e-203 Smith-Waterman score: 3234; 99.167% identity (99.583% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|114 KQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: :::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|114 IKHLQSDEYALLTRNVERDKYANFSINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|114 GMLCLYNGLTISAWNSLDVVTVELYPTDRRSTGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM ::::::::::::::::::: :::::::::: gi|114 SIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 >>gi|109077644|ref|XP_001105846.1| PREDICTED: similar to (727 aa) initn: 3230 init1: 3230 opt: 3230 Z-score: 3804.4 bits: 713.9 E(): 3.3e-203 Smith-Waterman score: 3230; 98.958% identity (99.583% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|109 KQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: :::::::::::::.:::::::.::::::::::::::::::::::::::::::::::: gi|109 IKHLQSDEYALLTRNVQRDKYANFSINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KSCTFEDVTSLNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM ::::::::::::::::::: :::::::::: gi|109 SIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 >>gi|108860966|sp|Q69ZS6.2|SV2C_MOUSE RecName: Full=Syna (727 aa) initn: 3192 init1: 3192 opt: 3192 Z-score: 3759.6 bits: 705.6 E(): 1e-200 Smith-Waterman score: 3192; 97.292% identity (99.583% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|108 KQSLLICMSVNGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|108 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: :::::::::::::..::::::.:::::::::::::::.::::.:::::::::::::: gi|108 IKHLQSDEYALLTRNVQKDKYANFSINFTMENQIHTGMEYENGRFLGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::.:::::::::::::::::.::::::::::::::::.::::.:::::::::::::: gi|108 KSCTFDDVTSVNTYFKNCTFIDTLFDNTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM .:::::::::::::::::: :::::::::: gi|108 AIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 >>gi|148668577|gb|EDL00896.1| mCG114899 [Mus musculus] (727 aa) initn: 3192 init1: 3192 opt: 3192 Z-score: 3759.6 bits: 705.6 E(): 1e-200 Smith-Waterman score: 3192; 97.292% identity (99.583% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|148 KQSLLICMSVNGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|148 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: :::::::::::::..::::::.:::::::::::::::.::::.:::::::::::::: gi|148 IKHLQSDEYALLTRNVQKDKYANFSINFTMENQIHTGMEYENGRFLGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::.:::::::::::::::::.::::::::::::::::.::::.:::::::::::::: gi|148 KSCTFDDVTSVNTYFKNCTFIDTLFDNTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM .:::::::::::::::::: :::::::::: gi|148 AIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 >>gi|81872902|sp|Q9Z2I6.1|SV2C_RAT RecName: Full=Synapti (727 aa) initn: 3191 init1: 3191 opt: 3191 Z-score: 3758.4 bits: 705.4 E(): 1.2e-200 Smith-Waterman score: 3191; 97.083% identity (99.583% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|818 KQSLLICMSVNGFFAFLSSFVQGYGFFLLCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|818 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: :::::::::::::..::::::.::::::::.:::::::::::.:::::::::::::: gi|818 IKHLQSDEYALLTRNVQKDKYANFSINFTMENQVHTGMEYDNGRFLGVKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY :::::.:::::::::::::::::.:.::::::::::::::.::::.:::::::::::::: gi|818 KSCTFDDVTSVNTYFKNCTFIDTLFENTDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM .:::::::::::::::::: :::::::::: gi|818 AIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 >>gi|82952102|ref|XP_928128.1| PREDICTED: similar to Syn (730 aa) initn: 3104 init1: 2019 opt: 3097 Z-score: 3647.6 bits: 684.9 E(): 1.8e-194 Smith-Waterman score: 3097; 95.031% identity (97.930% similar) in 483 aa overlap (1-480:248-730) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|829 KQSLLICMSVNGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 KIAA10 DTGTWYRRCFVR-IRTELYG--IWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWF :::::::: :: .. . : ::::::::::::::.::::::::::::::::::::::: gi|829 DTGTWYRRWNVRHLEERSLGNLIWLTFMRCFNYPVRENTIKLTIVWFTLSFGYYGLSVWF 400 410 420 430 440 450 210 220 230 240 250 260 KIAA10 PDVIKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKD ::::: :::::::::::::..::::::.:::::::::::::::.::::.::::::::::: gi|829 PDVIKHLQSDEYALLTRNVQKDKYANFSINFTMENQIHTGMEYENGRFLGVKFKSVTFKD 460 470 480 490 500 510 270 280 290 300 310 320 KIAA10 SVFKSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFD ::::::::.:::::::::::::::::.::::::::::::::::.::::.::::::::::: gi|829 SVFKSCTFDDVTSVNTYFKNCTFIDTLFDNTDFEPYKFIDSEFQNCSFLHNKTGCQITFD 520 530 540 550 560 570 330 340 350 360 370 380 KIAA10 DDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 DDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSES 580 590 600 610 620 630 390 400 410 420 430 440 KIAA10 MMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|829 MMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVS 640 650 660 670 680 690 450 460 470 480 KIAA10 ITKSIPILLASTVLVCGGLVGLCLPDTRTQVLM :::.:::::::::::::::::: :::::::::: gi|829 ITKAIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 730 >>gi|126320613|ref|XP_001363864.1| PREDICTED: similar to (727 aa) initn: 3093 init1: 3093 opt: 3093 Z-score: 3642.9 bits: 684.1 E(): 3.3e-194 Smith-Waterman score: 3093; 93.333% identity (98.333% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA10 RLLSGFGIGGAIPTVFSYFAEVLAREKRGE :::::::::::::::::::::::::::::: gi|126 RQSLLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGE 220 230 240 250 260 270 40 50 60 70 80 90 KIAA10 HLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HLSWLCMFWMIGAIYASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVAL 280 290 300 310 320 330 100 110 120 130 140 150 KIAA10 TFMPESPRFLLEVGKHDEAWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELIEIES :::::::::::::::::::::::: :::::::::::::::::::.::::::::::::::: gi|126 TFMPESPRFLLEVGKHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKTPKQIDELIEIES 340 350 360 370 380 390 160 170 180 190 200 210 KIAA10 DTGTWYRRCFVRIRTELYGIWLTFMRCFNYPVRDNTIKLTIVWFTLSFGYYGLSVWFPDV ::::::.:::::::::::::::::::::::::..::.::: ::::::::::::::::::: gi|126 DTGTWYKRCFVRIRTELYGIWLTFMRCFNYPVKENTLKLTAVWFTLSFGYYGLSVWFPDV 400 410 420 430 440 450 220 230 240 250 260 270 KIAA10 IKPLQSDEYALLTRNVERDKYANFTINFTMENQIHTGMEYDNGRFIGVKFKSVTFKDSVF :: ::::::: .::. :.: ::::.:::.::::::..:::::::.:.:::::::::::: gi|126 IKHLQSDEYAAHVRNIGREKVANFTLNFTLENQIHTSIEYDNGRFVGMKFKSVTFKDSVF 460 470 480 490 500 510 280 290 300 310 320 330 KIAA10 KSCTFEDVTSVNTYFKNCTFIDTVFDNTDFEPYKFIDSEFKNCSFFHNKTGCQITFDDDY ::::::::::.::::.:::::::.:::::::::::::::::::.:.::::::::.::::: gi|126 KSCTFEDVTSLNTYFRNCTFIDTLFDNTDFEPYKFIDSEFKNCTFLHNKTGCQISFDDDY 520 530 540 550 560 570 340 350 360 370 380 390 KIAA10 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMI 580 590 600 610 620 630 400 410 420 430 440 450 KIAA10 GMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITK ::::::::::::::::::::::::::::::.:::::::::::::::::::::::::.::: gi|126 GMLCLYNGLTISAWNSLDVVTVELYPTDRRSTGFGFLNALCKAAAVLGNLIFGSLVGITK 640 650 660 670 680 690 460 470 480 KIAA10 SIPILLASTVLVCGGLVGLCLPDTRTQVLM .:::::::::::::::::: :::::::::: gi|126 AIPILLASTVLVCGGLVGLRLPDTRTQVLM 700 710 720 480 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 16:02:49 2009 done: Tue Mar 3 16:07:12 2009 Total Scan time: 1515.120 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]