hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16072146/chunk_1/iprscan-20080501-16072146.nocrc
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Query sequence: KIAA1055
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00164                                                 213.0    2.7e-59   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00164    1/1     613   833 ..     1   310 []   213.0  2.7e-59

Alignments of top-scoring domains:
SM00164: domain 1 of 1, from 613 to 833: score 213.0, E = 2.7e-59
                   *->vrkGvppslRgeVWklLlnaqpmntsnweraqkakdaesqflvvndd
                      +r G+p+++R +VWk + + + ++ +++++                 
    KIAA1055   613    IRAGIPHEHRSKVWKWCVDRHTRKFKDNTE----------------- 642  

                   rlkdeYsrllnqtapkdkstdleqavssnnkdfeeqPLsiwnffqdndsl
                     ++++++ll ++ +k+  ++                             
    KIAA1055   643 --PGHFQTLLQKALEKQNPAS----------------------------- 661  

                   dqIekDlkRtfpelsfFqfrsrdnqkevllddengpgqesLrrvLkaYsl
                   +qIe+Dl Rt+p++ ++  +              ++g+++Lr+vL+a+s+
    KIAA1055   662 KQIELDLLRTLPNNKHYSCP-------------TSEGIQKLRNVLLAFSW 698  

                   ynpehivgYcQGmnflaapLLlvmpiydEedAFwcfvkLmerylpnflfk
                   +np+  +gYcQG+n l+a+ Ll++   + edAFwc+v + e   p+    
    KIAA1055   699 RNPD--IGYCQGLNRLVAVALLYL---EQEDAFWCLVTIVEVFMPR---- 739  

                   dtnnfytpdlsglqadqlvldslleeylPeLykHLqeqdkqskkkhvdkl
                       +yt++l g q dq+v+++l+ e lP L+ H++++            
    KIAA1055   740 ---DYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQY------------ 774  

                   eidpslyalrWfLtlFarelPledvlRiwDvlfaellrlgseflfkiala
                    +d +l ++ WfL++F + +  +++++iwD +++e    g++++f++ala
    KIAA1055   775 KVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYE----GPKVIFRFALA 820  

                   iLklnedkllkld<-*
                   ++k++e+++lkl    
    KIAA1055   821 LFKYKEEEILKLQ    833  

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