hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16122365/chunk_1/iprscan-20080501-16122365.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1058
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06920.3.ls Dedicator of cytokinesis                       407.0   2.5e-119   1
PF06920.3.fs Dedicator of cytokinesis                       405.1   9.3e-119   1
PF00169.19.fs PH domain                                       67.9    3.4e-20   1
PF00169.19.ls PH domain                                       69.9    7.6e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1     201   307 ..     1    92 []    67.9  3.4e-20
PF00169.19.ls   1/1     201   307 ..     1    92 []    69.9  7.6e-18
PF06920.3.fs   1/1    1911  2090 ..     1   190 []   405.1 9.3e-119
PF06920.3.ls   1/1    1911  2090 ..     1   190 []   407.0 2.5e-119

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 201 to 307: score 67.9, E = 3.4e-20
                   *->vikeGwLlkkg.......gkkswkkRyfvLfd.....dvLlyykdkk
                      ++k+GwL+k   ++  +   +s+k+R+f L + ++++ +L +ykd+k
    KIAA1058   201    ITKHGWLYKGNmnsaisvTMRSFKRRFFHLIQlgdgsYNLNFYKDEK 247  

                   ..kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseeerk
                    +k+pkgsi L+++  v+   +  r+++Fe++++d+ ++ll+a+se e++
    KIAA1058   248 isKEPKGSIFLDSCmGVVQNNKV-RRFAFELKMqDKSSYLLAADSEVEME 296  

                   eWvkaiqsair<-*
                   eW++ +++ +    
    KIAA1058   297 EWITILNKILQ    307  

PF00169.19.ls: domain 1 of 1, from 201 to 307: score 69.9, E = 7.6e-18
                   *->vikeGwLlkkg.......gkkswkkRyfvLfd.....dvLlyykdkk
                      ++k+GwL+k   ++  +   +s+k+R+f L + ++++ +L +ykd+k
    KIAA1058   201    ITKHGWLYKGNmnsaisvTMRSFKRRFFHLIQlgdgsYNLNFYKDEK 247  

                   ..kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseeerk
                    +k+pkgsi L+++  v+   +  r+++Fe++++d+ ++ll+a+se e++
    KIAA1058   248 isKEPKGSIFLDSCmGVVQNNKV-RRFAFELKMqDKSSYLLAADSEVEME 296  

                   eWvkaiqsair<-*
                   eW++ +++ +    
    KIAA1058   297 EWITILNKILQ    307  

PF06920.3.fs: domain 1 of 1, from 1911 to 2090: score 405.1, E = 9.3e-119
                   *->TyFernhnlrRFmFeTPFTktGraqGeleEQfKRkTILttensFPyi
                      T+Fer hn+rRFmFe+PFT+tG++qG++eEQ+KR+TILt++++FPy+
    KIAA1058  1911    TEFERSHNIRRFMFEMPFTQTGKRQGGVEEQCKRRTILTAIHCFPYV 1957 

                   ktRilViskeeieLsPIEVAIediqKKtaeLaaainqppssEGDqLpdlK
                   k+Ri+V+++++++L+PIEVAI++++KK+aeL++++++++       +d++
    KIAA1058  1958 KKRIPVMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSAE-------VDMI 2000 

                   mLQmvLQGSVgvtVNaGPLevAraFLanepadrlGrPpdrhvnkLrlvFr
                   +LQ++LQGSV+v+VNaGPL++AraFL++++++r+   pd++v+ L++vFr
    KIAA1058  2001 KLQLKLQGSVSVQVNAGPLAYARAFLDDTNTKRY---PDNKVKLLKEVFR 2047 

                   eFikrCkrALevNkrLIgeDQkEYqreLeeNYekLkeeLsplI<-*
                   +F+++C++AL+vN+rLI+eDQ+EYq+e+++NY+++ +eLs++    
    KIAA1058  2048 QFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSEIM    2090 

PF06920.3.ls: domain 1 of 1, from 1911 to 2090: score 407.0, E = 2.5e-119
                   *->TyFernhnlrRFmFeTPFTktGraqGeleEQfKRkTILttensFPyi
                      T+Fer hn+rRFmFe+PFT+tG++qG++eEQ+KR+TILt++++FPy+
    KIAA1058  1911    TEFERSHNIRRFMFEMPFTQTGKRQGGVEEQCKRRTILTAIHCFPYV 1957 

                   ktRilViskeeieLsPIEVAIediqKKtaeLaaainqppssEGDqLpdlK
                   k+Ri+V+++++++L+PIEVAI++++KK+aeL++++++++       +d++
    KIAA1058  1958 KKRIPVMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSAE-------VDMI 2000 

                   mLQmvLQGSVgvtVNaGPLevAraFLanepadrlGrPpdrhvnkLrlvFr
                   +LQ++LQGSV+v+VNaGPL++AraFL++++++r+   pd++v+ L++vFr
    KIAA1058  2001 KLQLKLQGSVSVQVNAGPLAYARAFLDDTNTKRY---PDNKVKLLKEVFR 2047 

                   eFikrCkrALevNkrLIgeDQkEYqreLeeNYekLkeeLsplI<-*
                   +F+++C++AL+vN+rLI+eDQ+EYq+e+++NY+++ +eLs++    
    KIAA1058  2048 QFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSEIM    2090 

//