hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16223069/chunk_1/iprscan-20080501-16223069.nocrc
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Query sequence: KIAA1064
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00642.15.fs Zinc finger C-x8-C-x5-C-x3-H type (and simil    74.2    4.9e-24   3
PF00642.15.ls Zinc finger C-x8-C-x5-C-x3-H type (and simil    74.4    3.3e-19   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00642.15.fs   1/3     403   428 ..     1    27 []    24.4  2.6e-07
PF00642.15.ls   1/3     403   428 ..     1    27 []    26.3  9.7e-05
PF00642.15.fs   2/3     432   457 ..     1    27 []    27.0  3.2e-08
PF00642.15.ls   2/3     432   457 ..     1    27 []    29.0  1.5e-05
PF00642.15.fs   3/3     459   481 ..     5    27 .]    22.8  8.4e-07
PF00642.15.ls   3/3     459   481 ..     1    27 []    19.0   0.0037

Alignments of top-scoring domains:
PF00642.15.fs: domain 1 of 3, from 403 to 428: score 24.4, E = 2.6e-07
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++++C++f + G+C  Gd C+F+H+    
    KIAA1064   403    KGKVICKYFVE-GRCTWGDHCNFSHDI    428  

PF00642.15.ls: domain 1 of 3, from 403 to 428: score 26.3, E = 9.7e-05
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++++C++f + G+C  Gd C+F+H+    
    KIAA1064   403    KGKVICKYFVE-GRCTWGDHCNFSHDI    428  

PF00642.15.fs: domain 2 of 3, from 432 to 457: score 27.0, E = 3.2e-08
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +k+elC+f+ + G+C + ++C+++Hg+   
    KIAA1064   432    KKRELCKFYIT-GFCARAENCPYMHGD    457  

PF00642.15.ls: domain 2 of 3, from 432 to 457: score 29.0, E = 1.5e-05
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +k+elC+f+ + G+C + ++C+++Hg+   
    KIAA1064   432    KKRELCKFYIT-GFCARAENCPYMHGD    457  

PF00642.15.fs: domain 3 of 3, from 459 to 481: score 22.8, E = 8.4e-07
                   *->lCrffsrtGtCkyGdrCkFaHge<-*
                      +C+ +++tG C  Gd+C F+H++   
    KIAA1064   459    PCKLYHTTGNCINGDDCMFSHDP    481  

PF00642.15.ls: domain 3 of 3, from 459 to 481: score 19.0, E = 0.0037
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                          +C+ +++tG C  Gd+C F+H++   
    KIAA1064   459    ----PCKLYHTTGNCINGDDCMFSHDP    481  

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