hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-16273506/chunk_1/iprscan-20080501-16273506.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1067 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF03081.6.ls Exo70 exocyst complex subunit 896.4 1.2e-266 1 PF03081.6.fs Exo70 exocyst complex subunit 894.4 4.8e-266 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF03081.6.fs 1/1 61 687 .. 1 710 [] 894.4 4.8e-266 PF03081.6.ls 1/1 61 687 .. 1 710 [] 896.4 1.2e-266 Alignments of top-scoring domains: PF03081.6.fs: domain 1 of 1, from 61 to 687: score 894.4, E = 4.8e-266 *->qqsfslspiqkrieaaediqgnIekwvskyahvsssydkvsslfsIl ++++s++p++k++e+++++q+n+ek++s+ +hv+s+y+++s++++I+ KIAA1067 61 KLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKII 107 rsgpreselkrflkvvkkLqdalkflqsnnaerpasaeLlkalldedLmq r+gp++ +l+++l++++k+q+a++++q+n+ p+s+eL+k+ +L++ KIAA1067 108 REGPTG-RLEEYLGSMAKIQKAVEYFQDNS---PDSPELNKV----KLLF 149 iamereasLqkeFlsilselhsssaeesnRsqLdpdsisgdsslesledv +++++ L++eF+s+++ +hs+ +++++L +d isgd+ le +edv KIAA1067 150 ERGKE--ALESEFRSLMT-RHSK----VVSPVLILDLISGDDDLEAQEDV 192 vrvlldesvlrlvviiHWLEQNLREYTNiralvryervqdsgslpykarv +++l+esvl++v++i +r+lv+y+r+qd+++++y++r KIAA1067 193 TLEHLPESVLQDVIRI------------SRWLVEYGRNQDFMNVYYQIR- 229 kkssSklldsiieRHGRlsevsatvmsdLksIaqrmiangyLGlDTPTke sS+l++si++ l+e++ +++s+++++++++i+n++ +DTPTk+ KIAA1067 230 ---SSQLDRSIKG----LKEHFHKSSSSSGVPYSPAIPNKR--KDTPTKK 270 CikiyksiRkskiveeslsqLgleklsigkvqkmdwevvedkikVLkWle ++k++++iRk++++ +++sq+gl++ ++g+++++++e+++d+++ ++++ KIAA1067 271 PVKRPGTIRKAQNLLKQYSQHGLDG-KKGGSNLIPLEGRDDMLD--VETD 317 avkvavstLlsgEkslcdlvFeaspstirescFaeIvkdalallLfefpe a++++vs+++++++s++ l+ +++p+++++++F+++++dal++l++e+++ KIAA1067 318 AYIHCVSAFVKLAQSEYQLLADIIPEHHQKKTFDSLIQDALDGLMLEGEN 367 aVaeskkkkckspekHDF.TlfklLdlydaisdlrLLQpdieelFsfasc +V++++ k++ +HDF+T+++++++++++++++ p++++++++++ KIAA1067 368 IVSAAR----KAIVRHDFsTVLTVFPILRHLKQTK---PEFDQVLQGTA- 409 ssvrnqalsslrrlgegirsilmEfVKGessirkdsDKskvpppgGgVHp +s++n++++++++++++++++l++f +++i++d+DK++++p++G+VH+ KIAA1067 410 ASTKNKLPGLITSMETIGAKALEDF---ADNIKNDPDKEYNMPKDGTVHE 456 LTryvmnFlssLaehFDVIGILAQDVdysetLtqillesplpsdtleipe LT++++ Fl++L+ d++et ++++l+s+ s KIAA1067 457 LTSNAILFLQQLL-------------DFQET-AGAMLASQETS------- 485 dyfetsssdvseseesssslLavyiawiilvLlcnldtKskaYnDqaLsy ss++s+s+e+s++lL++yi++++++L++nl +Ksk+Y+D+aLs+ KIAA1067 486 ------SSATSYSSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSA 529 GlFllNNlnYivkkvrsSqnLkdlLgddwltkheakrEeirqyatsYers +Fl+NN+nYi+k++++S +L++l++++++t+++++rE+i+q++++Y+r KIAA1067 530 -IFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYREHIEQQIQTYQR- 576 sWgkvtssLsdsnlikssggksl.dKdreeaKErFkkFNegFEEackkQs sW kvt++++++nl+++++g++l+dK+r+++KErFk+FN+g+EE+ck+Q+ KIAA1067 577 SWLKVTDYIAEKNLPVFQPGVKLrDKERQIIKERFKGFNDGLEELCKIQK 626 ewvipDpkLRdelkqsvkekilPvYrrFyerRaVyygnvdftkNpekYvK w+ipD+++Rd+++q++k +++++Y++F+++ g+v+ftkNpekY+K KIAA1067 627 AWAIPDTEQRDRIRQAQKTIVKETYGAFLQK----FGSVPFTKNPEKYIK 672 YtpedLenyLsdLFd<-* Y +e++++++++LFd KIAA1067 673 YGVEQVGDMIDRLFD 687 PF03081.6.ls: domain 1 of 1, from 61 to 687: score 896.4, E = 1.2e-266 *->qqsfslspiqkrieaaediqgnIekwvskyahvsssydkvsslfsIl ++++s++p++k++e+++++q+n+ek++s+ +hv+s+y+++s++++I+ KIAA1067 61 KLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKII 107 rsgpreselkrflkvvkkLqdalkflqsnnaerpasaeLlkalldedLmq r+gp++ +l+++l++++k+q+a++++q+n+ p+s+eL+k+ +L++ KIAA1067 108 REGPTG-RLEEYLGSMAKIQKAVEYFQDNS---PDSPELNKV----KLLF 149 iamereasLqkeFlsilselhsssaeesnRsqLdpdsisgdsslesledv +++++ L++eF+s+++ +hs+ +++++L +d isgd+ le +edv KIAA1067 150 ERGKE--ALESEFRSLMT-RHSK----VVSPVLILDLISGDDDLEAQEDV 192 vrvlldesvlrlvviiHWLEQNLREYTNiralvryervqdsgslpykarv +++l+esvl++v++i +r+lv+y+r+qd+++++y++r KIAA1067 193 TLEHLPESVLQDVIRI------------SRWLVEYGRNQDFMNVYYQIR- 229 kkssSklldsiieRHGRlsevsatvmsdLksIaqrmiangyLGlDTPTke sS+l++si++ l+e++ +++s+++++++++i+n++ +DTPTk+ KIAA1067 230 ---SSQLDRSIKG----LKEHFHKSSSSSGVPYSPAIPNKR--KDTPTKK 270 CikiyksiRkskiveeslsqLgleklsigkvqkmdwevvedkikVLkWle ++k++++iRk++++ +++sq+gl++ ++g+++++++e+++d+++ ++++ KIAA1067 271 PVKRPGTIRKAQNLLKQYSQHGLDG-KKGGSNLIPLEGRDDMLD--VETD 317 avkvavstLlsgEkslcdlvFeaspstirescFaeIvkdalallLfefpe a++++vs+++++++s++ l+ +++p+++++++F+++++dal++l++e+++ KIAA1067 318 AYIHCVSAFVKLAQSEYQLLADIIPEHHQKKTFDSLIQDALDGLMLEGEN 367 aVaeskkkkckspekHDF.TlfklLdlydaisdlrLLQpdieelFsfasc +V++++ k++ +HDF+T+++++++++++++++ p++++++++++ KIAA1067 368 IVSAAR----KAIVRHDFsTVLTVFPILRHLKQTK---PEFDQVLQGTA- 409 ssvrnqalsslrrlgegirsilmEfVKGessirkdsDKskvpppgGgVHp +s++n++++++++++++++++l++f +++i++d+DK++++p++G+VH+ KIAA1067 410 ASTKNKLPGLITSMETIGAKALEDF---ADNIKNDPDKEYNMPKDGTVHE 456 LTryvmnFlssLaehFDVIGILAQDVdysetLtqillesplpsdtleipe LT++++ Fl++L+ d++et ++++l+s+ s KIAA1067 457 LTSNAILFLQQLL-------------DFQET-AGAMLASQETS------- 485 dyfetsssdvseseesssslLavyiawiilvLlcnldtKskaYnDqaLsy ss++s+s+e+s++lL++yi++++++L++nl +Ksk+Y+D+aLs+ KIAA1067 486 ------SSATSYSSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSA 529 GlFllNNlnYivkkvrsSqnLkdlLgddwltkheakrEeirqyatsYers +Fl+NN+nYi+k++++S +L++l++++++t+++++rE+i+q++++Y+r KIAA1067 530 -IFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYREHIEQQIQTYQR- 576 sWgkvtssLsdsnlikssggksl.dKdreeaKErFkkFNegFEEackkQs sW kvt++++++nl+++++g++l+dK+r+++KErFk+FN+g+EE+ck+Q+ KIAA1067 577 SWLKVTDYIAEKNLPVFQPGVKLrDKERQIIKERFKGFNDGLEELCKIQK 626 ewvipDpkLRdelkqsvkekilPvYrrFyerRaVyygnvdftkNpekYvK w+ipD+++Rd+++q++k +++++Y++F+++ g+v+ftkNpekY+K KIAA1067 627 AWAIPDTEQRDRIRQAQKTIVKETYGAFLQK----FGSVPFTKNPEKYIK 672 YtpedLenyLsdLFd<-* Y +e++++++++LFd KIAA1067 673 YGVEQVGDMIDRLFD 687 //