hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16390925/chunk_1/iprscan-20080501-16390925.nocrc
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Query sequence: KIAA1074
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00023.20.ls Ankyrin repeat                                 137.0    4.6e-38   4
PF00023.20.fs Ankyrin repeat                                 129.1    1.2e-35   4
PF00170.11.fs bZIP transcription factor                       26.0      1e-06   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00023.20.fs   1/4      85   117 ..     1    33 []    37.1  2.3e-09
PF00023.20.ls   1/4      85   117 ..     1    33 []    39.1  1.4e-08
PF00023.20.ls   2/4     118   150 ..     1    33 []    31.4  2.9e-06
PF00023.20.fs   2/4     118   150 ..     1    33 []    29.4  3.2e-07
PF00023.20.fs   3/4     151   183 ..     1    33 []    31.4  8.8e-08
PF00023.20.ls   3/4     151   183 ..     1    33 []    33.4  7.1e-07
PF00023.20.ls   4/4     184   216 ..     1    33 []    33.1  9.2e-07
PF00023.20.fs   4/4     184   216 ..     1    33 []    31.1  1.1e-07

Alignments of top-scoring domains:
PF00023.20.fs: domain 1 of 4, from 85 to 117: score 37.1, E = 2.3e-09
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      + +T+LHlA+ +g++evv+lL+++ + ln+ d+   
    KIAA1074    85    MNRTALHLACANGHPEVVTLLVDRKCQLNVCDN    117  

PF00023.20.ls: domain 1 of 4, from 85 to 117: score 39.1, E = 1.4e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      + +T+LHlA+ +g++evv+lL+++ + ln+ d+   
    KIAA1074    85    MNRTALHLACANGHPEVVTLLVDRKCQLNVCDN    117  

PF00023.20.ls: domain 2 of 4, from 118 to 150: score 31.4, E = 2.9e-06
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      + +T+L+ A+++  +++++ Ll++GAd+n+ d    
    KIAA1074   118    ENRTALMKAVQCQEEKCATILLEHGADPNLADV    150  

PF00023.20.fs: domain 2 of 4, from 118 to 150: score 29.4, E = 3.2e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      + +T+L+ A+++  +++++ Ll++GAd+n+ d    
    KIAA1074   118    ENRTALMKAVQCQEEKCATILLEHGADPNLADV    150  

PF00023.20.fs: domain 3 of 4, from 151 to 183: score 31.4, E = 8.8e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+A+++ +++v++ Ll + A++ a+++   
    KIAA1074   151    HGNTALHYAVYNEDISVATKLLLYDANIEAKNK    183  

PF00023.20.ls: domain 3 of 4, from 151 to 183: score 33.4, E = 7.1e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+A+++ +++v++ Ll + A++ a+++   
    KIAA1074   151    HGNTALHYAVYNEDISVATKLLLYDANIEAKNK    183  

PF00023.20.ls: domain 4 of 4, from 184 to 216: score 33.1, E = 9.2e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      d  TPL lA++    ++v++L+++ A++na+d+   
    KIAA1074   184    DDLTPLLLAVSGKKQQMVEFLIKKKANVNAVDK    216  

PF00023.20.fs: domain 4 of 4, from 184 to 216: score 31.1, E = 1.1e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      d  TPL lA++    ++v++L+++ A++na+d+   
    KIAA1074   184    DDLTPLLLAVSGKKQQMVEFLIKKKANVNAVDK    216  

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