hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16455131/chunk_1/iprscan-20080501-16455131.nocrc
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Query sequence: KIAA1078
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08683.1.ls Protein of unknown function (DUF1781)          351.3   1.5e-102   1
PF08683.1.fs Protein of unknown function (DUF1781)          349.2   6.1e-102   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08683.1.fs   1/1    1224  1353 ..     1   131 []   349.2 6.1e-102
PF08683.1.ls   1/1    1224  1353 ..     1   131 []   351.3 1.5e-102

Alignments of top-scoring domains:
PF08683.1.fs: domain 1 of 1, from 1224 to 1353: score 349.2, E = 6.1e-102
                   *->sgpKLFkePsAKSNrgiIlNAlshCcLAGkVNepqKqkiLeelakse
                      +gpKL+kePsAKSN++iI+NAl+hCcLAGkVNe+qK+kiLee++ks 
    KIAA1078  1224    TGPKLYKEPSAKSNKHIIQNALAHCCLAGKVNEGQKKKILEEMEKSD 1270 

                   anHFLILFRDsgCQfRAlYsydpeteeltklaGtGPrkitekMvdklfKY
                   an+FLILFRDsgCQfR+lY+y+petee+ kl+G+GP++it+kM+++l+KY
    KIAA1078  1271 ANNFLILFRDSGCQFRSLYTYCPETEEINKLTGIGPKSITKKMIEGLYKY 1320 

                   nSgrKqFtQItptKhlSvsvDAfTIhdhLWQkKr<-*
                   nS+rKqF+ I p+K+lS+svDA+TIh+hLWQ+Kr   
    KIAA1078  1321 NSDRKQFSHI-PAKTLSASVDAITIHSHLWQTKR    1353 

PF08683.1.ls: domain 1 of 1, from 1224 to 1353: score 351.3, E = 1.5e-102
                   *->sgpKLFkePsAKSNrgiIlNAlshCcLAGkVNepqKqkiLeelakse
                      +gpKL+kePsAKSN++iI+NAl+hCcLAGkVNe+qK+kiLee++ks 
    KIAA1078  1224    TGPKLYKEPSAKSNKHIIQNALAHCCLAGKVNEGQKKKILEEMEKSD 1270 

                   anHFLILFRDsgCQfRAlYsydpeteeltklaGtGPrkitekMvdklfKY
                   an+FLILFRDsgCQfR+lY+y+petee+ kl+G+GP++it+kM+++l+KY
    KIAA1078  1271 ANNFLILFRDSGCQFRSLYTYCPETEEINKLTGIGPKSITKKMIEGLYKY 1320 

                   nSgrKqFtQItptKhlSvsvDAfTIhdhLWQkKr<-*
                   nS+rKqF+ I p+K+lS+svDA+TIh+hLWQ+Kr   
    KIAA1078  1321 NSDRKQFSHI-PAKTLSASVDAITIHSHLWQTKR    1353 

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