hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17144958/chunk_1/iprscan-20080501-17144958.nocrc
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Query sequence: KIAA1095
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                 154.9    8.3e-42   2
SM00184                                                  26.0     0.0052   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      50    87 ..     1    23 []    26.0   0.0052
SM00228    1/2     289   371 ..     1    80 []    85.7  5.4e-21
SM00228    2/2     461   536 ..     1    80 []    69.2  5.3e-16

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 50 to 87: score 26.0, E = 0.0052
                   *->CpICle....pvvlpCgH.FCr.Ci.........CPlC<-*
                      C++C+   ++p ++pCgH FC +C+ ++  ++++CP     
    KIAA1095    50    CALCHKvledPLTTPCGHvFCAgCVlpwvvqegsCPAR    87   

SM00228: domain 1 of 2, from 289 to 371: score 85.7, E = 5.4e-21
                   *->gglGfsivg..............gifvssvvpGspAakaGrkslglL
                      g+lGf+i g++++ +++++++++gifvs++v+ +pAak G+     L
    KIAA1095   289    GSLGFNIIGgrpsvdnhdgssseGIFVSKIVDSGPAAKEGG-----L 330  

                   kvGDvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++ D+I+eVNG  +++ +th++av++ k a++     ++++ vlR+    
    KIAA1095   331 QIHDRIIEVNG-RDLSRATHDQAVEAFKTAKE-----PIVVQVLRRT    371  

SM00228: domain 2 of 2, from 461 to 536: score 69.2, E = 5.3e-16
                   *->gglGfsivg........gifvssvvpGspAakaGrkslglLkvGDvI
                        lG+++  +++++++ gi++s++ p+s Aak+Gr     +++GD+I
    KIAA1095   461    DKLGLTVCYrtddeddiGIYISEIDPNSIAAKDGR-----IREGDRI 502  

                   leVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +++NG + v+    eeav+ll +  +    +  +L++ R++   
    KIAA1095   503 IQING-IEVQ--NREEAVALLTSEEN----KNFSLLIARPE    536  

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