hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17280889/chunk_1/iprscan-20080501-17280889.nocrc
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Query sequence: KIAA1103
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05010.4.ls Transforming acidic coiled-coil-containing p   445.9   4.9e-131   1
PF05010.4.fs Transforming acidic coiled-coil-containing p   444.0   1.8e-130   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05010.4.fs   1/1     245   451 ..     1   220 []   444.0 1.8e-130
PF05010.4.ls   1/1     245   451 ..     1   220 []   445.9 4.9e-131

Alignments of top-scoring domains:
PF05010.4.fs: domain 1 of 1, from 245 to 451: score 444.0, E = 1.8e-130
                   *->lkysqkDlDavekkikvevtreEvieKelevlElkeKyEelrkevlE
                      +++s++D++av     ++++reE+i+Ke+e++E+k+KyEe+r+evlE
    KIAA1103   245    ICLSESDKTAV-----LTLIREEIITKEIEANEWKKKYEETRQEVLE 286  

                   mgKtnaklnGivaeyEktiaqlieeeqrqkelserelQkvlkEkdqalaD
                   m+K       ivaeyEktiaq+i +eqr++++s++++Q++++Ek+qalaD
    KIAA1103   287 MRK-------IVAEYEKTIAQMI-DEQRTSMTSQKSFQQLTMEKEQALAD 328  

                   LnSlEkSfSDLFkRyEKqKEvleGyrkNEEsLkkcvedyLarikkeEQRY
                   LnS+E+S+SDLF+RyE+ K+vleG++kNEE+Lkkc++dyLar+k+eEQRY
    KIAA1103   329 LNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRY 378  

                   qaLKiHAeeKLdrANeeIAqvrskAqaEaaaLqAsLRKEqmkvqSLertL
                   qaLKiHAeeKLd+ANeeIAqvr+kA+aE+aaL+A+LRKEqmkv+SLer+L
    KIAA1103   379 QALKIHAEEKLDKANEEIAQVRTKAKAESAALHAGLRKEQMKVESLERAL 428  

                   eQKskEneELtKICDeLIaKmgK<-*
                   +QK++E+eELtKICDeLIaK+gK   
    KIAA1103   429 QQKNQEIEELTKICDELIAKLGK    451  

PF05010.4.ls: domain 1 of 1, from 245 to 451: score 445.9, E = 4.9e-131
                   *->lkysqkDlDavekkikvevtreEvieKelevlElkeKyEelrkevlE
                      +++s++D++av     ++++reE+i+Ke+e++E+k+KyEe+r+evlE
    KIAA1103   245    ICLSESDKTAV-----LTLIREEIITKEIEANEWKKKYEETRQEVLE 286  

                   mgKtnaklnGivaeyEktiaqlieeeqrqkelserelQkvlkEkdqalaD
                   m+K       ivaeyEktiaq+i +eqr++++s++++Q++++Ek+qalaD
    KIAA1103   287 MRK-------IVAEYEKTIAQMI-DEQRTSMTSQKSFQQLTMEKEQALAD 328  

                   LnSlEkSfSDLFkRyEKqKEvleGyrkNEEsLkkcvedyLarikkeEQRY
                   LnS+E+S+SDLF+RyE+ K+vleG++kNEE+Lkkc++dyLar+k+eEQRY
    KIAA1103   329 LNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRY 378  

                   qaLKiHAeeKLdrANeeIAqvrskAqaEaaaLqAsLRKEqmkvqSLertL
                   qaLKiHAeeKLd+ANeeIAqvr+kA+aE+aaL+A+LRKEqmkv+SLer+L
    KIAA1103   379 QALKIHAEEKLDKANEEIAQVRTKAKAESAALHAGLRKEQMKVESLERAL 428  

                   eQKskEneELtKICDeLIaKmgK<-*
                   +QK++E+eELtKICDeLIaK+gK   
    KIAA1103   429 QQKNQEIEELTKICDELIAKLGK    451  

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