hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17582379/chunk_1/iprscan-20080501-17582379.nocrc
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Query sequence: KIAA1121
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06292.8.ls Domain of Unknown Function (DUF1041)           150.9    3.2e-42   1
PF06292.8.fs Domain of Unknown Function (DUF1041)           149.0    9.4e-42   1
PF00169.19.fs PH domain                                       50.3    7.5e-15   1
PF00169.19.ls PH domain                                       52.3    1.5e-12   1
PF00168.20.ls C2 domain                                        6.0      0.059   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.ls   1/1     437   518 ..     1    88 []     6.0    0.059
PF00169.19.fs   1/1     559   661 ..     1    92 []    50.3  7.5e-15
PF00169.19.ls   1/1     559   661 ..     1    92 []    52.3  1.5e-12
PF06292.8.fs   1/1     872   977 ..     1   121 []   149.0  9.4e-42
PF06292.8.ls   1/1     872   977 ..     1   121 []   150.9  3.2e-42

Alignments of top-scoring domains:
PF00168.20.ls: domain 1 of 1, from 437 to 518: score 6.0, E = 0.059
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl
                      L+V ++e ++L+    +n+ +  Y+++++ g +k    +T  ++ + 
    KIAA1121   437    LEVVIMEVQGLKSLA-PNRIV--YCTMEVEGGEK---LQTDQAEAS- 476  

                   NPvWNEtFtFevpppdlqetLeieVyDydrfgr...ddflGevs<-*
                    P+W  + +F+ + + l   ++++++ + +     +d+ lG+v+   
    KIAA1121   477 KPTWGTQGDFS-TTHALPA-VKVKLFTESTGVLaleDKELGRVI    518  

PF00169.19.fs: domain 1 of 1, from 559 to 661: score 50.3, E = 7.5e-15
                   *->vikeGwLlkkg..gkkswkkRyfvLfd.....dvLlyykdkkkkpkg
                       +++G+L+  g++ +k+wkkR+fvL + ++ +  ++ y++kk++p+ 
    KIAA1121   559    MKHSGYLWAIGknVWKRWKKRFFVLVQvsqytFAMCSYREKKAEPQE 605  

                   sipLsgiqvtkvpdn.....krkncFeirt.dretlllqaeseeerkeWv
                    + L+g++v++++++++ +++r +   ++ +d  t++++ ++e++r  Wv
    KIAA1121   606 LLQLDGYTVDYTDPQpglegGRAFFNAVKEgD--TVIFASDDEQDRILWV 653  

                   kaiqsair<-*
                   +a+ +a     
    KIAA1121   654 QAMYRATG    661  

PF00169.19.ls: domain 1 of 1, from 559 to 661: score 52.3, E = 1.5e-12
                   *->vikeGwLlkkg..gkkswkkRyfvLfd.....dvLlyykdkkkkpkg
                       +++G+L+  g++ +k+wkkR+fvL + ++ +  ++ y++kk++p+ 
    KIAA1121   559    MKHSGYLWAIGknVWKRWKKRFFVLVQvsqytFAMCSYREKKAEPQE 605  

                   sipLsgiqvtkvpdn.....krkncFeirt.dretlllqaeseeerkeWv
                    + L+g++v++++++++ +++r +   ++ +d  t++++ ++e++r  Wv
    KIAA1121   606 LLQLDGYTVDYTDPQpglegGRAFFNAVKEgD--TVIFASDDEQDRILWV 653  

                   kaiqsair<-*
                   +a+ +a     
    KIAA1121   654 QAMYRATG    661  

PF06292.8.fs: domain 1 of 1, from 872 to 977: score 149.0, E = 9.4e-42
                   *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL
                      ktv+++cl++aa+v+y++++e++kiee+     q++a++v+R     
    KIAA1121   872    KTVIRKCLEQAALVNYSRLSEYAKIEEN-----QKDAENVGR----- 908  

                   MNNvQqlrvqlekkledmGGikLielvisvLkelqekl.......nkvLn
                           ++++kkled+  i+L+elvi+vL++++e++ +++ ++++   
    KIAA1121   909 -------LITPAKKLEDT--IRLAELVIEVLQQNEEHHaephvdkGE--- 946  

                   qFpqelnlgkesAedlwslfavdldsaleEq<-*
                   +F+++++l++e+Ae++ slfavd+d ale+q   
    KIAA1121   947 AFAWWSDLMVEHAETFLSLFAVDMDAALEVQ    977  

PF06292.8.ls: domain 1 of 1, from 872 to 977: score 150.9, E = 3.2e-42
                   *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL
                      ktv+++cl++aa+v+y++++e++kiee+     q++a++v+R     
    KIAA1121   872    KTVIRKCLEQAALVNYSRLSEYAKIEEN-----QKDAENVGR----- 908  

                   MNNvQqlrvqlekkledmGGikLielvisvLkelqekl.......nkvLn
                           ++++kkled+  i+L+elvi+vL++++e++ +++ ++++   
    KIAA1121   909 -------LITPAKKLEDT--IRLAELVIEVLQQNEEHHaephvdkGE--- 946  

                   qFpqelnlgkesAedlwslfavdldsaleEq<-*
                   +F+++++l++e+Ae++ slfavd+d ale+q   
    KIAA1121   947 AFAWWSDLMVEHAETFLSLFAVDMDAALEVQ    977  

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