# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/hj01698.fasta.nr -Q ../query/KIAA1122.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1122, 1040 aa vs /cdna2/lib/nr/nr library 3189105952 residues in 9321606 sequences statistics sampled from 60000 to 9313323 sequences Expectation_n fit: rho(ln(x))= 5.7400+/-0.000188; mu= 11.3898+/- 0.011 mean_var=90.2831+/-17.674, 0's: 23 Z-trim: 55 B-trim: 348 in 1/65 Lambda= 0.134980 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(9321606) gi|119626456|gb|EAX06051.1| SWI/SNF-related, matri (1028) 6713 1318.2 0 gi|119626455|gb|EAX06050.1| SWI/SNF-related, matri (1026) 6689 1313.5 0 gi|28278128|gb|AAH45534.1| SWI/SNF-related, matrix (1028) 6688 1313.3 0 gi|29428005|sp|Q9H4L7.1|SMRCD_HUMAN RecName: Full= (1026) 6684 1312.5 0 gi|119893620|ref|XP_001251200.1| PREDICTED: simila (1029) 6535 1283.5 0 gi|194208967|ref|XP_001497269.2| PREDICTED: simila (1029) 6534 1283.3 0 gi|74001934|ref|XP_535658.2| PREDICTED: similar to (1025) 6497 1276.1 0 gi|164607171|ref|NP_001101334.2| SWI/SNF-related, (1024) 6199 1218.1 0 gi|50866|emb|CAA49560.1| enhancer-trap-locus-1 [Mu (1136) 6156 1209.7 0 gi|29427670|sp|Q04692.2|SMRCD_MOUSE RecName: Full= (1021) 6137 1206.0 0 gi|119626454|gb|EAX06049.1| SWI/SNF-related, matri ( 911) 5942 1168.0 0 gi|114595206|ref|XP_001163635.1| PREDICTED: SWI/SN ( 891) 5820 1144.2 0 gi|67970134|dbj|BAE01411.1| unnamed protein produc ( 889) 5762 1132.9 0 gi|149701562|ref|XP_001497332.1| PREDICTED: simila ( 892) 5708 1122.4 0 gi|126330702|ref|XP_001365797.1| PREDICTED: simila (1030) 5504 1082.7 0 gi|148666356|gb|EDK98772.1| SWI/SNF-related, matri ( 866) 5175 1018.6 0 gi|27502706|gb|AAH42442.1| Smarcad1 protein [Mus m ( 836) 5134 1010.6 0 gi|149638070|ref|XP_001509622.1| PREDICTED: simila ( 872) 4600 906.6 0 gi|14042204|dbj|BAB55150.1| unnamed protein produc ( 702) 4583 903.2 0 gi|74144080|dbj|BAE22146.1| unnamed protein produc ( 760) 4470 881.3 0 gi|118090021|ref|XP_420485.2| PREDICTED: similar t ( 969) 4396 866.9 0 gi|149037041|gb|EDL91602.1| SWI/SNF-related, matri ( 729) 4297 847.6 0 gi|148666355|gb|EDK98771.1| SWI/SNF-related, matri (1032) 4235 835.6 0 gi|58618908|gb|AAH89242.1| SWI/SNF-related, matrix (1003) 4195 827.8 0 gi|221043716|dbj|BAH13535.1| unnamed protein produ ( 596) 3907 771.5 0 gi|8977885|emb|CAB95769.1| hypothetical protein [H ( 594) 3895 769.2 0 gi|224049423|ref|XP_002191909.1| PREDICTED: hypoth (1108) 3753 741.8 5.5e-211 gi|189524164|ref|XP_691636.3| PREDICTED: similar t (1011) 3037 602.3 4.8e-169 gi|47217489|emb|CAG10869.1| unnamed protein produc ( 861) 2875 570.7 1.3e-159 gi|169146048|emb|CAQ14040.1| novel protein similar ( 972) 2836 563.1 2.8e-157 gi|167860150|ref|NP_001018610.2| SWI/SNF-related, ( 972) 2835 562.9 3.2e-157 gi|229274972|gb|EEN45800.1| hypothetical protein B ( 987) 2431 484.3 1.6e-133 gi|12224998|emb|CAC21685.1| hypothetical protein [ ( 375) 2420 481.8 3.3e-133 gi|10436220|dbj|BAB14759.1| unnamed protein produc ( 361) 2342 466.6 1.2e-128 gi|74190834|dbj|BAE28202.1| unnamed protein produc ( 424) 2336 465.5 3e-128 gi|115647222|ref|XP_797049.2| PREDICTED: similar t (1279) 2194 438.2 1.5e-119 gi|115930771|ref|XP_001182799.1| PREDICTED: simila (1302) 2194 438.2 1.5e-119 gi|215499788|gb|EEC09282.1| DNA repair and recombi ( 614) 2189 437.0 1.7e-119 gi|156220188|gb|EDO41059.1| predicted protein [Nem ( 627) 2168 432.9 2.9e-118 gi|156547006|ref|XP_001600490.1| PREDICTED: simila ( 843) 2116 422.9 4.1e-115 gi|198429753|ref|XP_002130424.1| PREDICTED: simila ( 747) 2112 422.1 6.4e-115 gi|190584963|gb|EDV25032.1| hypothetical protein T ( 678) 2088 417.4 1.5e-113 gi|110755099|ref|XP_396302.3| PREDICTED: similar t ( 830) 2080 415.9 5.2e-113 gi|91089209|ref|XP_967093.1| PREDICTED: similar to ( 871) 2078 415.5 7.1e-113 gi|194162505|gb|EDW77406.1| GK18104 [Drosophila wi ( 842) 2013 402.8 4.4e-109 gi|116283573|gb|AAH17953.1| SMARCAD1 protein [Homo ( 318) 1994 398.8 2.7e-108 gi|194106414|gb|EDW28457.1| GL19201 [Drosophila pe ( 833) 1987 397.8 1.5e-107 gi|193913651|gb|EDW12518.1| GI24344 [Drosophila mo ( 843) 1979 396.2 4.4e-107 gi|194148901|gb|EDW64599.1| GJ21604 [Drosophila vi ( 842) 1970 394.5 1.5e-106 gi|190616699|gb|EDV32223.1| GF14153 [Drosophila an ( 842) 1967 393.9 2.2e-106 >>gi|119626456|gb|EAX06051.1| SWI/SNF-related, matrix-as (1028 aa) initn: 6713 init1: 6713 opt: 6713 Z-score: 7061.1 bits: 1318.2 E(): 0 Smith-Waterman score: 6713; 100.000% identity (100.000% similar) in 1028 aa overlap (13-1040:1-1028) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS 350 360 370 380 390 400 430 440 450 460 470 480 KIAA11 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK 410 420 430 440 450 460 490 500 510 520 530 540 KIAA11 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK 470 480 490 500 510 520 550 560 570 580 590 600 KIAA11 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF 530 540 550 560 570 580 610 620 630 640 650 660 KIAA11 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN 590 600 610 620 630 640 670 680 690 700 710 720 KIAA11 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI 650 660 670 680 690 700 730 740 750 760 770 780 KIAA11 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE 710 720 730 740 750 760 790 800 810 820 830 840 KIAA11 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT 770 780 790 800 810 820 850 860 870 880 890 900 KIAA11 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL 830 840 850 860 870 880 910 920 930 940 950 960 KIAA11 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL 890 900 910 920 930 940 970 980 990 1000 1010 1020 KIAA11 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE 950 960 970 980 990 1000 1030 1040 KIAA11 GDEGSMPADIATLLKTSMGL :::::::::::::::::::: gi|119 GDEGSMPADIATLLKTSMGL 1010 1020 >>gi|119626455|gb|EAX06050.1| SWI/SNF-related, matrix-as (1026 aa) initn: 6689 init1: 4987 opt: 6689 Z-score: 7035.9 bits: 1313.5 E(): 0 Smith-Waterman score: 6689; 99.805% identity (99.805% similar) in 1028 aa overlap (13-1040:1-1026) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS 350 360 370 380 390 400 430 440 450 460 470 480 KIAA11 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK 410 420 430 440 450 460 490 500 510 520 530 540 KIAA11 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK 470 480 490 500 510 520 550 560 570 580 590 600 KIAA11 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF 530 540 550 560 570 580 610 620 630 640 650 660 KIAA11 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN 590 600 610 620 630 640 670 680 690 700 710 720 KIAA11 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI 650 660 670 680 690 700 730 740 750 760 770 780 KIAA11 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|119 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNL--E 710 720 730 740 750 760 790 800 810 820 830 840 KIAA11 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT 770 780 790 800 810 820 850 860 870 880 890 900 KIAA11 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL 830 840 850 860 870 880 910 920 930 940 950 960 KIAA11 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL 890 900 910 920 930 940 970 980 990 1000 1010 1020 KIAA11 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE 950 960 970 980 990 1000 1030 1040 KIAA11 GDEGSMPADIATLLKTSMGL :::::::::::::::::::: gi|119 GDEGSMPADIATLLKTSMGL 1010 1020 >>gi|28278128|gb|AAH45534.1| SWI/SNF-related, matrix-ass (1028 aa) initn: 6688 init1: 6688 opt: 6688 Z-score: 7034.8 bits: 1313.3 E(): 0 Smith-Waterman score: 6688; 99.611% identity (99.903% similar) in 1028 aa overlap (13-1040:1-1028) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE :::::::::::::::::::::::::::::::::::::::::::::::: gi|282 MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|282 KKTRLDHGEESNESAESSNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LKVFAEDQDMQYASQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 FNQKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS 350 360 370 380 390 400 430 440 450 460 470 480 KIAA11 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK 410 420 430 440 450 460 490 500 510 520 530 540 KIAA11 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK 470 480 490 500 510 520 550 560 570 580 590 600 KIAA11 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF 530 540 550 560 570 580 610 620 630 640 650 660 KIAA11 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN 590 600 610 620 630 640 670 680 690 700 710 720 KIAA11 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI 650 660 670 680 690 700 730 740 750 760 770 780 KIAA11 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE 710 720 730 740 750 760 790 800 810 820 830 840 KIAA11 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT 770 780 790 800 810 820 850 860 870 880 890 900 KIAA11 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL 830 840 850 860 870 880 910 920 930 940 950 960 KIAA11 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL 890 900 910 920 930 940 970 980 990 1000 1010 1020 KIAA11 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|282 HDIDCNPYNDKQAEDRCHRVGQTKEALVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE 950 960 970 980 990 1000 1030 1040 KIAA11 GDEGSMPADIATLLKTSMGL :::::::::::::::::::: gi|282 GDEGSMPADIATLLKTSMGL 1010 1020 >>gi|29428005|sp|Q9H4L7.1|SMRCD_HUMAN RecName: Full=SWI/ (1026 aa) initn: 6684 init1: 4982 opt: 6684 Z-score: 7030.6 bits: 1312.5 E(): 0 Smith-Waterman score: 6684; 99.708% identity (99.805% similar) in 1028 aa overlap (13-1040:1-1026) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE :::::::::::::::::::::::::::::::::::::::::::::::: gi|294 MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKEL 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 FPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSI 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 KKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALES 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 LKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|294 LKVFAEDQDMQYASQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNV 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 FNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCS 350 360 370 380 390 400 430 440 450 460 470 480 KIAA11 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 QKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNK 410 420 430 440 450 460 490 500 510 520 530 540 KIAA11 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 LTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGK 470 480 490 500 510 520 550 560 570 580 590 600 KIAA11 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 TIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF 530 540 550 560 570 580 610 620 630 640 650 660 KIAA11 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTIN 590 600 610 620 630 640 670 680 690 700 710 720 KIAA11 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 ANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERI 650 660 670 680 690 700 730 740 750 760 770 780 KIAA11 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|294 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNL--E 710 720 730 740 750 760 790 800 810 820 830 840 KIAA11 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 KNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT 770 780 790 800 810 820 850 860 870 880 890 900 KIAA11 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 DFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDIL 830 840 850 860 870 880 910 920 930 940 950 960 KIAA11 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 EVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVIL 890 900 910 920 930 940 970 980 990 1000 1010 1020 KIAA11 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 HDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDE 950 960 970 980 990 1000 1030 1040 KIAA11 GDEGSMPADIATLLKTSMGL :::::::::::::::::::: gi|294 GDEGSMPADIATLLKTSMGL 1010 1020 >>gi|119893620|ref|XP_001251200.1| PREDICTED: similar to (1029 aa) initn: 5677 init1: 5677 opt: 6535 Z-score: 6873.8 bits: 1283.5 E(): 0 Smith-Waterman score: 6535; 96.793% identity (99.028% similar) in 1029 aa overlap (13-1040:1-1029) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN ::::.:::::.:::::::::::::.:.::::::::::::::::::::::::::::::::. gi|119 VSRAGTPDSDVTEKTEDSSVPETPENDRKASISYFKNQRGIQYIDLSSDSEDVVSPNCSS 50 60 70 80 90 100 130 140 150 160 170 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRND-DISELEDLSELEDLKDAKLQTLKE ::::: ::::::::::::::::::::::::: ::. :::::::::::::::::::::::: gi|119 TVQEKKFNKDTVIIVSEPSEDEESQGLPTMATRNNNDISELEDLSELEDLKDAKLQTLKE 110 120 130 140 150 160 180 190 200 210 220 230 KIAA11 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS :::::::.::::::.::::::::::::::::::::::::::::::::::.:::::::::: gi|119 LFPQRSDSDLLKLIDSTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPFEEDEFNDDQS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA11 IKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE .:: :::::::::::::::.:::::::::::::::::::::.:::::::::::::::::: gi|119 MKKKRLDHGEESNESAESSTNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALE 230 240 250 260 270 280 300 310 320 330 340 350 KIAA11 SLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKN :::::::::::::.: :: :::::::::::::::::.::::::: ::: ::::::::::: gi|119 SLKVFAEDQDMQYASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKN 290 300 310 320 330 340 360 370 380 390 400 410 KIAA11 VFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VFNPKRVIEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC 350 360 370 380 390 400 420 430 440 450 460 470 KIAA11 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|119 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIKLMNKCEDISN 410 420 430 440 450 460 480 490 500 510 520 530 KIAA11 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|119 KLTKQVTMLTGNGGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG 470 480 490 500 510 520 540 550 560 570 580 590 KIAA11 KTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|119 KTIQAIAFLAYLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 530 540 550 560 570 580 600 610 620 630 640 650 KIAA11 FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI .:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YNIHSRYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI 590 600 610 620 630 640 660 670 680 690 700 710 KIAA11 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|119 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKER 650 660 670 680 690 700 720 730 740 750 760 770 KIAA11 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVT ::::::::::::::::::::::::::::::::::::::::::::..:::::::::::.:: gi|119 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMVT 710 720 730 740 750 760 780 790 800 810 820 830 KIAA11 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM 770 780 790 800 810 820 840 850 860 870 880 890 KIAA11 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI 830 840 850 860 870 880 900 910 920 930 940 950 KIAA11 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI 890 900 910 920 930 940 960 970 980 990 1000 1010 KIAA11 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|119 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVD 950 960 970 980 990 1000 1020 1030 1040 KIAA11 EGDEGSMPADIATLLKTSMGL ::::::::::::::::::::: gi|119 EGDEGSMPADIATLLKTSMGL 1010 1020 >>gi|194208967|ref|XP_001497269.2| PREDICTED: similar to (1029 aa) initn: 5708 init1: 5708 opt: 6534 Z-score: 6872.7 bits: 1283.3 E(): 0 Smith-Waterman score: 6534; 97.182% identity (99.125% similar) in 1029 aa overlap (13-1040:1-1029) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE ::::::::::::::.:.::::::::: ::::::::::::::::::::: gi|194 MNLFNLDRFRFEKRSKVEEAPEATPQLSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN ::::.:::::::::::::::::::.:::::::::.::::::::::::::::::.:::::. gi|194 VSRAGTPDSDITEKTEDSSVPETPENERKASISYLKNQRGIQYIDLSSDSEDVISPNCSS 50 60 70 80 90 100 130 140 150 160 170 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMA-RRNDDISELEDLSELEDLKDAKLQTLKE ::::: ::.:::::::::::::::::::.:: : :.:::::::::::::::::::::::: gi|194 TVQEKKFNRDTVIIVSEPSEDEESQGLPAMAGRNNNDISELEDLSELEDLKDAKLQTLKE 110 120 130 140 150 160 180 190 200 210 220 230 KIAA11 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LFPQRSDSDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA11 IKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IKKKRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE 230 240 250 260 270 280 300 310 320 330 340 350 KIAA11 SLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKN :::::::::::::.:::: :::::::::::::::::.::::::: ::: ::::::::::: gi|194 SLKVFAEDQDMQYASQSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKN 290 300 310 320 330 340 360 370 380 390 400 410 KIAA11 VFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VFNPKRVIEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC 350 360 370 380 390 400 420 430 440 450 460 470 KIAA11 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN 410 420 430 440 450 460 480 490 500 510 520 530 KIAA11 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG 470 480 490 500 510 520 540 550 560 570 580 590 KIAA11 KTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|194 KTIQAIAFLAYLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 530 540 550 560 570 580 600 610 620 630 640 650 KIAA11 FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI .::::.::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YNIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI 590 600 610 620 630 640 660 670 680 690 700 710 KIAA11 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER 650 660 670 680 690 700 720 730 740 750 760 770 KIAA11 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVT :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::.:: gi|194 IAHAKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMVT 710 720 730 740 750 760 780 790 800 810 820 830 KIAA11 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM 770 780 790 800 810 820 840 850 860 870 880 890 KIAA11 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|194 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDI 830 840 850 860 870 880 900 910 920 930 940 950 KIAA11 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI 890 900 910 920 930 940 960 970 980 990 1000 1010 KIAA11 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD 950 960 970 980 990 1000 1020 1030 1040 KIAA11 EGDEGSMPADIATLLKTSMGL ::::::::::::::::::::: gi|194 EGDEGSMPADIATLLKTSMGL 1010 1020 >>gi|74001934|ref|XP_535658.2| PREDICTED: similar to SWI (1025 aa) initn: 5969 init1: 4001 opt: 6497 Z-score: 6833.8 bits: 1276.1 E(): 0 Smith-Waterman score: 6497; 96.793% identity (98.834% similar) in 1029 aa overlap (13-1040:1-1025) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE ::::::::::::::.::::.:::.:::::::::::::::::::::: gi|740 MNLFNLDRFRFEKRSKIEEVPEAAPQPSQPGPSSPISLSAEEENAE-- 10 20 30 40 70 80 90 100 110 120 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSN ::::.:::::::::::::::::: .:::::::::::::::::::::::::::.::::::. gi|740 VSRAGTPDSDITEKTEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSS 50 60 70 80 90 100 130 140 150 160 170 KIAA11 TVQEKTFNKDTVIIVSEPSEDEESQGLPTMA-RRNDDISELEDLSELEDLKDAKLQTLKE ::::: ::::::::::::::::::::::::. : :::::::::::::::::::::::::: gi|740 TVQEKKFNKDTVIIVSEPSEDEESQGLPTMSGRNNDDISELEDLSELEDLKDAKLQTLKE 110 120 130 140 150 160 180 190 200 210 220 230 KIAA11 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA11 IKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE ::: :::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|740 IKKKRLDHGEESNESAESSNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE 230 240 250 260 270 280 300 310 320 330 340 350 KIAA11 SLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKN :::::::::::::.:::: :::::.:::::::::::.::::::: ::: ::::::::::: gi|740 SLKVFAEDQDMQYASQSEFPNGKEASSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKN 290 300 310 320 330 340 360 370 380 390 400 410 KIAA11 VFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 VFNPKRVIEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC 350 360 370 380 390 400 420 430 440 450 460 470 KIAA11 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN 410 420 430 440 450 460 480 490 500 510 520 530 KIAA11 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG 470 480 490 500 510 520 540 550 560 570 580 590 KIAA11 KTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|740 KTIQAIAFLAYLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 530 540 550 560 570 580 600 610 620 630 640 650 KIAA11 FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI .::::.::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 YNIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI 590 600 610 620 630 640 660 670 680 690 700 710 KIAA11 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER 650 660 670 680 690 700 720 730 740 750 760 770 KIAA11 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVT :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::. gi|740 IAHAKQIIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNI-- 710 720 730 740 750 760 780 790 800 810 820 830 KIAA11 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 EKSTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM 770 780 790 800 810 820 840 850 860 870 880 890 KIAA11 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI 830 840 850 860 870 880 900 910 920 930 940 950 KIAA11 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI 890 900 910 920 930 940 960 970 980 990 1000 1010 KIAA11 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD 950 960 970 980 990 1000 1020 1030 1040 KIAA11 EGDEGSMPADIATLLKTSMGL :::::.::::::::::::::: gi|740 EGDEGTMPADIATLLKTSMGL 1010 1020 >>gi|164607171|ref|NP_001101334.2| SWI/SNF-related, matr (1024 aa) initn: 5201 init1: 2796 opt: 6199 Z-score: 6520.2 bits: 1218.1 E(): 0 Smith-Waterman score: 6199; 92.906% identity (96.987% similar) in 1029 aa overlap (13-1040:1-1024) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE ::::::::::::::.::::::::.:::::::::::::::::::::::: gi|164 MNLFNLDRFRFEKRSKIEEAPEAAPQPSQPGPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ-YIDLSSDSEDVVSPNCS ::::::::::.::::::::::: :::: :::.: :.::: :: ::::::::::: ::::: gi|164 VSRANTPDSDVTEKTEDSSVPEPPDNESKASLSCFQNQRTIQEYIDLSSDSEDV-SPNCS 50 60 70 80 90 100 120 130 140 150 160 170 KIAA11 NTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKE .::::: :.::::::::::::::::. ::. .:::: ::::::::::::::::::::::: gi|164 STVQEKKFSKDTVIIVSEPSEDEESHDLPSATRRND-ISELEDLSELEDLKDAKLQTLKE 110 120 130 140 150 160 180 190 200 210 220 230 KIAA11 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS :::::::.::::::.:::::::::::::: :::::::::::::::::: ::::: ::::: gi|164 LFPQRSDSDLLKLIDSTSTMDGAIAAALLKFGDAGGGPRKRKLSSSSEAYEEDEANDDQS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA11 IKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE .:: : :. ::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|164 LKKPRGDRREESNESAEASSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE 230 240 250 260 270 280 300 310 320 330 340 350 KIAA11 SLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKN ::::::::::.: .::::: :::::. :.::: :::.: :.:::.::: ::::::::::: gi|164 SLKVFAEDQDVQCASQSEVTNGKEVA-RNQNYSKNAAKIKMKQKISMKPQNGFNKKRKKN 290 300 310 320 330 340 360 370 380 390 400 410 KIAA11 VFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC :::::..:::::::::::.:::::::::: ::::::::::::::::::::::::::::.: gi|164 VFNPKKAVEDSEYDSGSDAGSSLDEDYSSCEEVMEDGYKGKILHFLQDASIGELTLIPKC 350 360 370 380 390 400 420 430 440 450 460 470 KIAA11 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN :::::::: ::::::.::.::::::: :::::::::.:::.::::::::::::::::::: gi|164 SQKKAQKIIELRPFNNWETLFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISN 410 420 430 440 450 460 480 490 500 510 520 530 KIAA11 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|164 KLTKQVTMLTGNGGGWNIEQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG 470 480 490 500 510 520 540 550 560 570 580 590 KIAA11 KTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR ::::::::::::.::::.::::::::::::::::::::::::::.::::::::::::::: gi|164 KTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIR 530 540 550 560 570 580 600 610 620 630 640 650 KIAA11 FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI ::::..:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 FNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI 590 600 610 620 630 640 660 670 680 690 700 710 KIAA11 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER :: ::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|164 NARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKER 650 660 670 680 690 700 720 730 740 750 760 770 KIAA11 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVT :::::::::::::::::::::: ::::::.:::::::::::::: ::::::::::::: gi|164 IAHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNL-- 710 720 730 740 750 760 780 790 800 810 820 830 KIAA11 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM 770 780 790 800 810 820 840 850 860 870 880 890 KIAA11 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI ::::::::::::.:::..::::::::::::::.::::::::::::::::::::::::::: gi|164 TDFELHVLCKQYQHINSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDI 830 840 850 860 870 880 900 910 920 930 940 950 KIAA11 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI 890 900 910 920 930 940 960 970 980 990 1000 1010 KIAA11 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD 950 960 970 980 990 1000 1020 1030 1040 KIAA11 EGDEGSMPADIATLLKTSMGL :.::::::::::::::::::: gi|164 EADEGSMPADIATLLKTSMGL 1010 1020 >>gi|50866|emb|CAA49560.1| enhancer-trap-locus-1 [Mus mu (1136 aa) initn: 5175 init1: 2776 opt: 6156 Z-score: 6474.3 bits: 1209.7 E(): 0 Smith-Waterman score: 6156; 91.618% identity (96.435% similar) in 1038 aa overlap (4-1040:107-1136) 10 20 30 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAP : .::. :::::::::::::::.:::::: gi|508 VEAAGARCGLRGGKAGAHLCGPASSLKAVSPLRVVVPPNMNLFNLDRFRFEKRSKIEEAP 80 90 100 110 120 130 40 50 60 70 80 90 KIAA11 EATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASIS ::.::::: ::::::::::::::::: :::::::::.::::::::::: ::::::::.: gi|508 EAAPQPSQARPSSPISLSAEEENAEGEGSRANTPDSDVTEKTEDSSVPEPPDNERKASLS 140 150 160 170 180 190 100 110 120 130 140 150 KIAA11 YFKNQRGIQ-YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMAR :.:::.:: :::::::.::: :::::.::::: :.::::::::::::::::. ::...: gi|508 CFQNQRAIQEYIDLSSDTEDV-SPNCSSTVQEKKFSKDTVIIVSEPSEDEESHDLPSVTR 200 210 220 230 240 250 160 170 180 190 200 210 KIAA11 RNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKLIESTSTMDGAIAAALLMFGD :::. :::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|508 RNDS-SELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKLIESTSTMDGAIAAALLMFGD 260 270 280 290 300 310 220 230 240 250 260 270 KIAA11 AGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQ :::::::::::::: :::. :::::.:. : :.:::::::::.::::::::::::::: gi|508 AGGGPRKRKLSSSS---EEDDVNDDQSVKQPRGDRGEESNESAEASSNWEKQESIVLKLQ 320 330 340 350 360 370 280 290 300 310 320 330 KIAA11 KEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYP :::::::::::::::::::::::::::::::::::::.: .::::: :::::. :.::: gi|508 KEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDVQCASQSEVTNGKEVA-RNQNYS 380 390 400 410 420 430 340 350 360 370 380 390 KIAA11 KNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEV ::::: :.:::.:.: ::::::::::::::::..:::::::::::.:::::::::: ::: gi|508 KNATKIKMKQKISVKPQNGFNKKRKKNVFNPKKAVEDSEYDSGSDAGSSLDEDYSSCEEV 440 450 460 470 480 490 400 410 420 430 440 450 KIAA11 MEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSED :::::::::::::: .::.::::::.::::::::::::::::.:::::::::: :::::: gi|508 MEDGYKGKILHFLQVSSIAELTLIPKCSQKKAQKITELRPFNNWEALFTKMSKINGLSED 500 510 520 530 540 550 460 470 480 490 500 510 KIAA11 LIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPY :::.:::.:::::::::::::::::::::::::::::::::::: ::::.:::::::::: gi|508 LIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNREQPSLLNQSLSLKPY 560 570 580 590 600 610 520 530 540 550 560 570 KIAA11 QKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNW :::::::::::::::::::::::::::::::::::::::.::::.::::::::::::::: gi|508 QKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNW 620 630 640 650 660 670 580 590 600 610 620 630 KIAA11 LREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRL :::::::::.:.:::::::::::::::::::..::::::::::::::::::::::::::: gi|508 LREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRL 680 690 700 710 720 730 640 650 660 670 680 690 KIAA11 KLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFS ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|508 KLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFS 740 750 760 770 780 790 700 710 720 730 740 750 KIAA11 SSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIEL ::::::::::::::: ::::::::::::::::::::::::::::::::: :::::::::: gi|508 SSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDRIEL 800 810 820 830 840 850 760 770 780 790 800 810 KIAA11 CAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLK ::::::::::: ::::::::::::: :::::::::::::::::::::::::::: :::: gi|508 CAMSEKQEQLYSGLFNRLKKSINNL--EKNTEMCNVMMQLRKMANHPLLHRQYYTPEKLK 860 870 880 890 900 820 830 840 850 860 870 KIAA11 EMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFRV :::::::::::::::::::::::::::::::::::::::.:::..::::::::::::::. gi|508 EMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQLDMDLILDSGKFRA 910 920 930 940 950 960 880 890 900 910 920 930 KIAA11 LGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 LGCSLSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNT 970 980 990 1000 1010 1020 940 950 960 970 980 990 KIAA11 DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLI 1030 1040 1050 1060 1070 1080 1000 1010 1020 1030 1040 KIAA11 SQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKTSMGL ::::::::::::::::::::::::::::.::::::::::::::::::: gi|508 SQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKTSMGL 1090 1100 1110 1120 1130 >>gi|29427670|sp|Q04692.2|SMRCD_MOUSE RecName: Full=SWI/ (1021 aa) initn: 5156 init1: 2776 opt: 6137 Z-score: 6455.0 bits: 1206.0 E(): 0 Smith-Waterman score: 6137; 92.128% identity (96.793% similar) in 1029 aa overlap (13-1040:1-1021) 10 20 30 40 50 60 KIAA11 SPHPCKVVLSTNMNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGE ::::::::::::::.::::::::.::::: ::::::::::::::::: gi|294 MNLFNLDRFRFEKRSKIEEAPEAAPQPSQARPSSPISLSAEEENAEGE 10 20 30 40 70 80 90 100 110 KIAA11 VSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ-YIDLSSDSEDVVSPNCS :::::::::.::::::::::: ::::::::.: :.:::.:: :::::::.::: ::::: gi|294 GSRANTPDSDVTEKTEDSSVPEPPDNERKASLSCFQNQRAIQEYIDLSSDTEDV-SPNCS 50 60 70 80 90 100 120 130 140 150 160 170 KIAA11 NTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKE .::::: :.::::::::::::::::. ::...::::. :::::::::::::::::::::: gi|294 STVQEKKFSKDTVIIVSEPSEDEESHDLPSVTRRNDS-SELEDLSELEDLKDAKLQTLKE 110 120 130 140 150 160 180 190 200 210 220 230 KIAA11 LFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQS :::::::.:::::::::::::::::::::::::::::::::::::::: ::. ::::: gi|294 LFPQRSDSDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSE---EDDVNDDQS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA11 IKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE .:. : :.:::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|294 VKQPRGDRGEESNESAEASSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALE 230 240 250 260 270 280 300 310 320 330 340 350 KIAA11 SLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKN ::::::::::.: .::::: :::::. :.::: ::::: :.:::.:.: ::::::::::: gi|294 SLKVFAEDQDVQCASQSEVTNGKEVA-RNQNYSKNATKIKMKQKISVKPQNGFNKKRKKN 290 300 310 320 330 340 360 370 380 390 400 410 KIAA11 VFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQC :::::..:::::::::::.:::::::::: ::::::::::::::::: .::.::::::.: gi|294 VFNPKKAVEDSEYDSGSDAGSSLDEDYSSCEEVMEDGYKGKILHFLQVSSIAELTLIPKC 350 360 370 380 390 400 420 430 440 450 460 470 KIAA11 SQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISN :::::::::::::::.:::::::::: :::::::::.:::.::::::::::::::::::: gi|294 SQKKAQKITELRPFNNWEALFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISN 410 420 430 440 450 460 480 490 500 510 520 530 KIAA11 KLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG ::::::::::::::::: ::::.::::::::::::::::::::::::::::::::::::: gi|294 KLTKQVTMLTGNGGGWNREQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLG 470 480 490 500 510 520 540 550 560 570 580 590 KIAA11 KTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR ::::::::::::.::::.::::::::::::::::::::::::.:.::::::::::::::: gi|294 KTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIR 530 540 550 560 570 580 600 610 620 630 640 650 KIAA11 FNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI ::::..:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 FNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI 590 600 610 620 630 640 660 670 680 690 700 710 KIAA11 NANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKER :: ::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|294 NARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKER 650 660 670 680 690 700 720 730 740 750 760 770 KIAA11 IAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVT :::::::::::::::::::::: ::::::::::::::::::::: ::::::::::::: gi|294 IAHAKQIIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNL-- 710 720 730 740 750 760 780 790 800 810 820 830 KIAA11 EKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|294 EKNTEMCNVMMQLRKMANHPLLHRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVM 770 780 790 800 810 820 840 850 860 870 880 890 KIAA11 TDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDI ::::::::::::.:::..::::::::::::::.::::::::::::::::::::::::::: gi|294 TDFELHVLCKQYQHINSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDI 830 840 850 860 870 880 900 910 920 930 940 950 KIAA11 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 LEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVI 890 900 910 920 930 940 960 970 980 990 1000 1010 KIAA11 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|294 LHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVD 950 960 970 980 990 1000 1020 1030 1040 KIAA11 EGDEGSMPADIATLLKTSMGL :.::::::::::::::::::: gi|294 EADEGSMPADIATLLKTSMGL 1010 1020 1040 residues in 1 query sequences 3189105952 residues in 9321606 library sequences Tcomplib [34.26] (2 proc) start: Wed Aug 5 15:56:07 2009 done: Wed Aug 5 16:06:43 2009 Total Scan time: 1383.910 Total Display time: 0.630 Function used was FASTA [version 34.26.5 April 26, 2007]