hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18131774/chunk_1/iprscan-20080501-18131774.nocrc
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Query sequence: KIAA1130
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00535.16.fs   Glycosyl transferase family 2            83.5    1.6e-24   1
PF00535.16.ls   Glycosyl transferase family 2            85.4    1.6e-22   1
PF00652.12.fs   Ricin-type beta-trefoil lectin domain    32.1    6.7e-10   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00535.16.fs     1/1     159   341 ..     1   149 []    83.5  1.6e-24
PF00535.16.ls     1/1     159   341 ..     1   149 []    85.4  1.6e-22
PF00652.12.fs     1/1     464   546 ..     1    89 [.    32.1  6.7e-10

Alignments of top-scoring domains:
PF00535.16.fs: domain 1 of 1, from 159 to 341: score 83.5, E = 1.6e-24
                   *->SiiiPtYNe.ekyleecleSllnQt.tyenfEiivVDDgStDgtvei
                      S+ii ++Ne  ++l+++++S+ln t+     Eii+VDD S  + +e 
    KIAA1130   159    SVIITFHNEaRSTLLRTVKSVLNRTpANLIQEIILVDDFS--SDPED 203  

                   aeeyakdprirvirleenlGlaaArNaGlkkAtGdydyiaflDaDdel.p
                   +  +   p+++ +r+++++Gl + r +G++ A     +++flD+++e++ 
    KIAA1130   204 CLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAAT--VLTFLDSHCEVnT 251  

                   dwleklvellekngadivig.rv.in.e.n.kgr................
                   +wl++++++ +++   +v + ++ i+ +++ +   + + +++ + + + +
    KIAA1130   252 EWLPPMLQRVKEDHTRVVSPiIDvISlDnFaYLAasadlrggfdwslhfk 301  

                   .......lngk.l.r.l.l.v.fli.snalyrrealekll<-*
                    +  + + + ++++ ++++++++  ++ +++ ++++++l+   
    KIAA1130   302 weqipleQKMTrTdPtRpIrTpVIAgGIFVIDKSWFNHLG    341  

PF00535.16.ls: domain 1 of 1, from 159 to 341: score 85.4, E = 1.6e-22
                   *->SiiiPtYNe.ekyleecleSllnQt.tyenfEiivVDDgStDgtvei
                      S+ii ++Ne  ++l+++++S+ln t+     Eii+VDD S  + +e 
    KIAA1130   159    SVIITFHNEaRSTLLRTVKSVLNRTpANLIQEIILVDDFS--SDPED 203  

                   aeeyakdprirvirleenlGlaaArNaGlkkAtGdydyiaflDaDdel.p
                   +  +   p+++ +r+++++Gl + r +G++ A     +++flD+++e++ 
    KIAA1130   204 CLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAAT--VLTFLDSHCEVnT 251  

                   dwleklvellekngadivig.rv.in.e.n.kgr................
                   +wl++++++ +++   +v + ++ i+ +++ +   + + +++ + + + +
    KIAA1130   252 EWLPPMLQRVKEDHTRVVSPiIDvISlDnFaYLAasadlrggfdwslhfk 301  

                   .......lngk.l.r.l.l.v.fli.snalyrrealekll<-*
                    +  + + + ++++ ++++++++  ++ +++ ++++++l+   
    KIAA1130   302 weqipleQKMTrTdPtRpIrTpVIAgGIFVIDKSWFNHLG    341  

PF00652.12.fs: domain 1 of 1, from 464 to 546: score 32.1, E = 6.7e-10
                   *->asgeirnvgrasglCLDvpggntadggpvglypChg.....gggndQ
                       +g+i++    +  CL+++g+nta    +g+  C g+ ++++++  Q
    KIAA1130   464    LPGIIKQ----GVNCLESQGQNTAGDFLLGMGICRGsaknpQPA--Q 504  

                   lWfetltgdgeirsngnssllCLdvsggg.tadGskvvlwpCngg.gnQ<
                    W   ++++  i++ g+    CL++ +   +++Gs+v+l+ Cn+ +g Q 
    KIAA1130   505 AW--LFSDH-LIQQQGK----CLAATSTLmSSPGSPVILQMCNPReGKQ  546  

                   -*
                     
    KIAA1130     -    -    

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