hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-18251244/chunk_1/iprscan-20080501-18251244.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1137 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01652 ATPase-Plipid: phospholipid-translocati 708.3 1.8e-210 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 300.8 8.3e-88 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01652 1/1 1 844 [. 1 1249 [] 708.3 1.8e-210 TIGR01494 1/6 63 154 .. 158 236 .. 64.3 4.2e-17 TIGR01494 4/6 385 434 .. 317 366 .. 67.6 5.7e-18 TIGR01494 5/6 520 635 .. 356 466 .. 118.3 7.2e-33 Alignments of top-scoring domains: TIGR01652: domain 1 of 1, from 1 to 844: score 708.3, E = 1.8e-210 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp KIAA1137 - ----------------------------------------------- - tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN KIAA1137 - -------------------------------------------------- - vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish KIAA1137 - -------------------------------------------------- - RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve KIAA1137 - -------------------------------------------------- - ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK KIAA1137 - -------------------------------------------------- - lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI KIAA1137 - -------------------------------------------------- - rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr N++ + + KR+ KIAA1137 1 --------------------------------------NSGRT-KFKRTS 11 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks i + +N l++ +F++L+ + i+++g++i+ g Yl d KIAA1137 12 IDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGMR---FQVYLPWDEA 58 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty +a gF sf+ ++I ++ +PISLYVs+E+++ + + y KIAA1137 59 V---------DSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHS-Y 98 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk FIn+D m k tPa++Rt +LnEeLGQVeYiFSDKTGTLTqNiM F KIAA1137 99 FINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 148 KcsIaGvsYgSdgltevkdalrerkgskveeesakvakDknsmlnelkil KcsI+G+sYg d ++ v ++e g e + ++++ KIAA1137 149 KCSINGHSYG-DVFD-VLGHKAEL-G-----E--------RPEPVDFS-- 180 ksnsqkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCHtVvPe + a k f F+dp L+ k+ ++p + eFf++L +CHtV e KIAA1137 181 --FNPLADKKFLFWDPSLLEAVKI--GDPHT---HEFFRLLSLCHTVMSE 223 vnddddpeKGeitYQAaSPDEaALVkaArdlGFvfieRtpksIsllieer + +e Ge++Y+A+SPDE+ALV+aAr++GFvf +Rtpk +++ +e+ KIAA1137 224 ----EKNE-GELYYKAQSPDEGALVTAARNFGFVFRSRTPK--TITVHEM 266 GkkGkkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDdgrilLlcKGA G +Y++L +l Fn RKRMSvIvR+P+g i+L+cKGA KIAA1137 267 G-----TAITYQLLAILDFNNIRKRMSVIVRNPEG------KIRLYCKGA 305 DsVifkRLssssGsggnqvieeTkeHLenyAsEGLRTLciAyReLseeEY D++ + RL + T+ HL+ yA EGLRTL++Ay++L+ee Y KIAA1137 306 DTILLDRLHH----STQELLNTTMDHLNEYAGEGLRTLVLAYKDLDEEYY 351 eeWneeYneAstaLtedReekLdevAelIEkdLiLLGaTAIEDKLQeGVP eeW e+ +As+a + Re++L ++e E + LLGaTAIEDKLQ GVP KIAA1137 352 EEWAERRLQASLAQD-SREDRLASIYEEVENNMMLLGATAIEDKLQQGVP 400 etIElLreAGIKiWVLTGDKvETAINIGySCrLlsenM.elivIkeesdd etI+lL A+IKiWVLTGDK+ETA NIGySC+ l+ +M+e+++++ + KIAA1137 401 ETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMtEVFIVTGHT-- 448 IrelEdagdldater.vveaaikkiLkeyfelegteeefnelkkdhvpsg lE + +l + + + + + + +++ +++ + +++ g KIAA1137 449 --VLEVREELRKAREkMMDSSRSVGNGFTYQDKLSSSKLTSVLE--AVAG 494 nvALvIDGksLkyaLdeeDlekeFLqLAlkCkAViCCRVSPsQKAdVVkL +ALvI G+sL aL+ + e eFL+ A+ CkAViCCRV+P+QKA+VV L KIAA1137 495 EYALVINGHSLAHALEAD-MELEFLETACACKAVICCRVTPLQKAQVVEL 543 VKkstGrlskiTLAIGDGANDVSMIQeADVGVGIsGkEGmQAvMASDFAI VKk +++TLAIGD ANDVSMI +A++GVGIsG+EG QAv+ASD++ KIAA1137 544 VKK---YKKAVTLAIGDEANDVSMIKTAHIGVGISGQEGIQAVLASDYSF 590 gQFrFLekLLLVHGrWSYkRiskmIlYfFYKNlifalilFWYsfyngFsG QF+FL +LLLVHGrWSY R++k +YfFYKN +f++ FW++f+ gFs KIAA1137 591 SQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSA 640 qtlyedWymvlYNvfFTalPVivLGvfDqDvsaslslryPqLYreGqkgk qt y+ ++ lYN ++T+lPV + GvfDqDv ++ s+ yP LY Gq++ KIAA1137 641 QTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNL 690 efstkvFwgwmldglyQSlviFffpilayklgdfvssG.evddfssvGvi f+ + F+ + g+y S Ff+p+ +++ +++ +G++++d+ s v+ KIAA1137 691 LFNKREFFICIAQGIYTSVLMFFIPYGVFAD-ATRDDGtQLADYQSFAVT 739 vfTalVvvvnlkiaLeinrWnwisliaiwgSiLvwlifviv.....yssi v T+lV+vv ++i+L++ +W+ i + +iwgS+ v+++ ++ +++++ + KIAA1137 740 VATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAmhsngLFDM 789 fptlPadisrefykaakrvmstfgFWlvLlvivlisLLPrFtykalqrlf fp f + a ++ + Wl+ ++++++++ P++++++l + KIAA1137 790 FP-----NQFRFVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFLRLNL 834 rPtdyeiVqE<-* +P ++V+ KIAA1137 835 KPDLSDTVRY 844 TIGR01494: domain 1 of 6, from 63 to 154: score 64.3, E = 4.2e-17 *->lwtffkiflralillviaiPiaLpvavtialavg......dkrmail ++++f +f+ ++i+l+ ++Pi+L+v+v+++++ ++ + dk+m ++ KIAA1137 63 FFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHsyfinwDKKMFCM 109 .......vrslnalEelGqvdyicsDKTGTLTenkmtfkkvyigg<-* +++++ ++r+ +++EelGqv+yi+sDKTGTLT+n m f k++i+g KIAA1137 110 kkrtpaeARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSING 154 TIGR01494: domain 4 of 6, from 385 to 434: score 67.6, E = 5.7e-18 *->llGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAkec llG+taieD+L+ +v+etI++L a+ik+w+lTGD++eTA++I+++c KIAA1137 385 LLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSC 431 glf<-* +++ KIAA1137 432 KML 434 TIGR01494: domain 5 of 6, from 520 to 635: score 118.3, E = 7.2e-33 *->AiaIAkecglfARvsPeqKaeiVellqkr.gaiVamiGDGaNDapAL +++ +k++ +++Rv+P+qKa++Vel++k+++a++++iGD aND++++ KIAA1137 520 TACACKAV-ICCRVTPLQKAQVVELVKKYkKAVTLAIGDEANDVSMI 565 kaADVGiaig......AkaaaDivltddnlslivlllvhGRwtykrikkl k A++G++i+++++ +A+ a+D+++ ++ +l +lllvhGRw+y r++k+ KIAA1137 566 KTAHIGVGISgqegiqAVLASDYSFSQF-KFLQRLLLVHGRWSYLRMCKF 614 ilyalyynliliillfvlsvi<-* ++y++y+n++++++ f++ ++ KIAA1137 615 LCYFFYKNFAFTMVHFWFGFF 635 //