# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh03679s1.fasta.nr -Q ../query/KIAA1154.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1154, 476 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7822776 sequences Expectation_n fit: rho(ln(x))= 5.9610+/-0.000192; mu= 7.8283+/- 0.011 mean_var=97.0661+/-18.587, 0's: 26 Z-trim: 36 B-trim: 229 in 1/65 Lambda= 0.130179 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|147744557|sp|Q9UHG0.2|DCDC2_HUMAN RecName: Full ( 476) 3093 591.1 2e-166 gi|29791794|gb|AAH50704.1| DCDC2 protein [Homo sap ( 476) 3092 591.0 2.3e-166 gi|109069771|ref|XP_001100219.1| PREDICTED: double ( 476) 2982 570.3 3.7e-160 gi|149731826|ref|XP_001495221.1| PREDICTED: simila ( 476) 2809 537.8 2.3e-150 gi|194039722|ref|XP_001928023.1| PREDICTED: simila ( 474) 2770 530.5 3.6e-148 gi|114605671|ref|XP_527599.2| PREDICTED: doublecor ( 469) 2739 524.7 2e-146 gi|74004140|ref|XP_853515.1| PREDICTED: similar to ( 505) 2619 502.1 1.3e-139 gi|149031521|gb|EDL86488.1| doublecortin domain co ( 475) 2594 497.4 3.2e-138 gi|56205629|emb|CAI24561.1| doublecortin domain co ( 475) 2583 495.4 1.3e-137 gi|71153322|sp|Q5DU00.2|DCDC2_MOUSE RecName: Full= ( 475) 2578 494.4 2.6e-137 gi|126321944|ref|XP_001366751.1| PREDICTED: simila ( 468) 2245 431.9 1.7e-118 gi|149490133|ref|XP_001510300.1| PREDICTED: simila ( 479) 2111 406.7 6.6e-111 gi|149031520|gb|EDL86487.1| doublecortin domain co ( 371) 1878 362.9 8e-98 gi|148700516|gb|EDL32463.1| doublecortin domain co ( 371) 1873 361.9 1.5e-97 gi|28175451|gb|AAH45136.1| Doublecortin domain con ( 368) 1794 347.1 4.5e-93 gi|28302179|gb|AAH46665.1| MGC52970 protein [Xenop ( 486) 1466 285.6 1.9e-74 gi|55665487|emb|CAH71788.1| doublecortin domain co ( 229) 1108 218.1 1.9e-54 gi|6453454|emb|CAB61371.1| hypothetical protein [H ( 236) 1095 215.7 1e-53 gi|47215221|emb|CAF96719.1| unnamed protein produc ( 223) 866 172.6 8.9e-41 gi|220678349|emb|CAX13134.1| novel protein similar ( 447) 705 142.6 1.9e-31 gi|79151921|gb|AAI08063.1| Zgc:123267 [Danio rerio ( 448) 704 142.4 2.2e-31 gi|13537216|dbj|BAB40784.1| HrDoublecortin [Halocy ( 803) 705 142.8 3e-31 gi|189531015|ref|XP_689955.3| PREDICTED: similar t ( 375) 692 140.1 9.1e-31 gi|198431881|ref|XP_002130300.1| PREDICTED: simila ( 887) 691 140.2 2e-30 gi|6684527|gb|AAF23610.1|AF181720_1 RU2S [Homo sap ( 97) 631 128.2 9e-28 gi|119575845|gb|EAW55441.1| hCG36730, isoform CRA_ ( 98) 631 128.2 9e-28 gi|210103823|gb|EEA51854.1| hypothetical protein B ( 408) 638 130.0 1.1e-27 gi|159164249|pdb|2DNF|A Chain A, Solution Structur ( 108) 626 127.3 1.9e-27 gi|109479230|ref|XP_001075564.1| PREDICTED: simila ( 362) 585 120.0 9.9e-25 gi|109478096|ref|XP_576011.2| PREDICTED: similar t ( 467) 585 120.1 1.2e-24 gi|194207759|ref|XP_001917349.1| PREDICTED: simila ( 349) 579 118.9 2.1e-24 gi|113412792|ref|XP_001127882.1| PREDICTED: hypoth ( 531) 567 116.8 1.4e-23 gi|169163596|ref|XP_001715955.1| PREDICTED: hypoth ( 652) 567 116.8 1.6e-23 gi|169164176|ref|XP_001719843.1| PREDICTED: hypoth ( 735) 567 116.9 1.8e-23 gi|114575937|ref|XP_525678.2| PREDICTED: hypotheti ( 760) 566 116.7 2.1e-23 gi|47230039|emb|CAG10453.1| unnamed protein produc ( 226) 544 112.2 1.4e-22 gi|55959678|emb|CAI17105.1| doublecortin domain co ( 87) 538 110.7 1.5e-22 gi|158706437|sp|A2VCK2.1|DCD2B_HUMAN RecName: Full ( 349) 538 111.2 4.4e-22 gi|210129768|gb|EEA77441.1| hypothetical protein B ( 209) 523 108.2 2.1e-21 gi|114555357|ref|XP_513279.2| PREDICTED: similar t ( 346) 524 108.6 2.7e-21 gi|194664363|ref|XP_592329.4| PREDICTED: similar t ( 341) 509 105.7 1.9e-20 gi|156225438|gb|EDO46255.1| predicted protein [Nem ( 404) 485 101.3 4.9e-19 gi|220678350|emb|CAX13135.1| novel protein similar ( 153) 473 98.7 1.1e-18 gi|148700515|gb|EDL32462.1| doublecortin domain co ( 108) 429 90.3 2.6e-16 gi|149031519|gb|EDL86486.1| doublecortin domain co ( 108) 423 89.2 5.6e-16 gi|126327453|ref|XP_001367866.1| PREDICTED: simila ( 740) 370 79.9 2.5e-12 gi|221040592|dbj|BAH11973.1| unnamed protein produ ( 619) 367 79.3 3.2e-12 gi|55661174|emb|CAH70657.1| doublecortin and CaM k ( 729) 367 79.3 3.6e-12 gi|6716520|gb|AAF26674.1|AF155820_1 doublecortin-l ( 527) 365 78.8 3.6e-12 gi|73993281|ref|XP_849124.1| PREDICTED: similar to ( 740) 367 79.3 3.7e-12 >>gi|147744557|sp|Q9UHG0.2|DCDC2_HUMAN RecName: Full=Dou (476 aa) initn: 3093 init1: 3093 opt: 3093 Z-score: 3144.1 bits: 591.1 E(): 2e-166 Smith-Waterman score: 3093; 99.790% identity (100.000% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|147 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSELLFDKSTMRRPFGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN 370 380 390 400 410 420 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA 430 440 450 460 470 >>gi|29791794|gb|AAH50704.1| DCDC2 protein [Homo sapiens (476 aa) initn: 3092 init1: 3092 opt: 3092 Z-score: 3143.1 bits: 591.0 E(): 2.3e-166 Smith-Waterman score: 3092; 99.790% identity (99.790% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 AVRNIYTPRTDHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN 370 380 390 400 410 420 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|297 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA 430 440 450 460 470 >>gi|109069771|ref|XP_001100219.1| PREDICTED: doublecort (476 aa) initn: 2982 init1: 2982 opt: 2982 Z-score: 3031.5 bits: 570.3 E(): 3.7e-160 Smith-Waterman score: 2982; 95.168% identity (99.160% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG ::::::::::::::::::::::::::::.:::::::::::::::.::::::::::::::: gi|109 MSGSSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|109 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKALNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::.:.:::::::::::::::::::::::.::.:::::::::::::::: gi|109 SGAVHRLYTLEGKLIENGAELENGQFYVAVGRDKFKKLPYSELIFDKSTMRRPFGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::.::::.:::::::::: :::::.:::::::: :.::::::::: gi|109 LPPIVGSRKSKGSGNDRQSKSTIGSSDNSSPQPPKRKGKREDVNSEKLMKVKQNVKLKNS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN ::::::::::::::::::::::::::::.::: :::.:: ::::::::::::::::.::: gi|109 EQKEDFSGMNGDLEEEGGREATDAPEQVKEILGHSEEQAGPARVNGGTDEENGEELDQVN 370 380 390 400 410 420 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA :::::.::.:::::::::::::::.::::::::::.::::::::::.::::::::: gi|109 NELQLALDEERKSQGAGSGQDEADLDPQRPPRPEVRITSPEENENNKQNKDYAAVA 430 440 450 460 470 >>gi|149731826|ref|XP_001495221.1| PREDICTED: similar to (476 aa) initn: 2809 init1: 2809 opt: 2809 Z-score: 2855.9 bits: 537.8 E(): 2.3e-150 Smith-Waterman score: 2809; 89.286% identity (97.059% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :::.::::::::::::::::::::::::.:::::::::::::::.::::::::::::::: gi|149 MSGTSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::::::::::.::.:::::::::::::::::::::::::::::::::..:::: gi|149 AVRNIYTPRTGHRIRKLEQIKSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNSQVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::::::::::::::::::::::::::::..::::::::::.:::::.:::::::::::: gi|149 IHSRINVSARFRKPLQEPCTIFLIANGDLVSPASRLLIPRKALNQWDRVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS :::::::::::::::::::::::::::::::::::::::::::::::::::: .:::.:: gi|149 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRSYGQKTSS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::.::::::::::::::: ::::::.:::::: :: :::::::.: gi|149 LPPIVGSRKSKGSGNDRQSKSTVGSSDNSSPQPAKRKGKKDDVNSEKPTKEKQNVKLKDS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA . .::::::::::: ::::::::::::::::::::.::::::::.::::::::: :::: gi|149 PQPVPNSDEGIFKAGEERSETRGAAEVQEDEDTQVEIPVDQRPAEMVDEEEDGEKENKDA 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN ::::::::.::..::::: ::.::::::::::: .:.:: ::::::::::::::::.::: gi|149 EQKEDFSGVNGEVEEEGGGEASDAPEQVEEILDLGEEQAGPARVNGGTDEENGEELDQVN 370 380 390 400 410 420 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA :::: ..:.: ::::::.::::.:.::: :::::::::::.::.::.::::::.:: gi|149 NELQEAVDEEIKSQGAGDGQDEVDLDPQGPPRPEVKITSPQENDNNEQNKDYAVVA 430 440 450 460 470 >>gi|194039722|ref|XP_001928023.1| PREDICTED: similar to (474 aa) initn: 2770 init1: 2770 opt: 2770 Z-score: 2816.3 bits: 530.5 E(): 3.6e-148 Smith-Waterman score: 2770; 88.747% identity (96.178% similar) in 471 aa overlap (1-471:1-471) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :::.::::::::::::::::::::::::.:::::::::::::::.::::::::::::::: gi|194 MSGTSARSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::::::::::::..:::::::::::::::::::::::.:::::..:::::::: gi|194 AVRNIYTPRTGHRIRKLDQLESGGNYVAGGQEAFKKLNYLDIGEMKKRPMDAVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::.::::::::::: :::::::::::::::::::::::::.:::::::::::::::::: gi|194 IHSKINVSARFRKPLLEPCTIFLIANGDLINPASRLLIPRKALNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS :::::::::::::::::::::::::::::::::::::::::::::::::::: .:::::: gi|194 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRSYGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::.::::::::::::::: ::::::::::::: :. :::.::::: gi|194 LPPIVGSRKSKGSGNDRQSKSTVGSSDNSSPQPPKRKGKKEDVNSEKPTRGKQNAKLKNS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA :.::::::.:::: :::::::::.::::::::::.:::::::::::::::::: :::. gi|194 PPTVPNSDEGVFKAGEERSETRGAAQVQEDEDTQVEIPVDQRPAEIVDEEEDGEKENKDV 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN :::::: :::::.::::::::. .:::::: ::.:.:: ::::.:::::::::::.: : gi|194 EQKEDFLGMNGDVEEEGGREAAGTPEQVEETPDHKEEQAGPARVSGGTDEENGEELDQPN 370 380 390 400 410 420 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA :::: ..:.: :::::::::.:.: ::::::.:::::::::::.:..:::: gi|194 NELQEAVDEEVKSQGAGSGQEEVDSDPQRPPKPEVKITSPEENDNSEQNKDNLS 430 440 450 460 470 >>gi|114605671|ref|XP_527599.2| PREDICTED: doublecortin (469 aa) initn: 2736 init1: 2507 opt: 2739 Z-score: 2784.9 bits: 524.7 E(): 2e-146 Smith-Waterman score: 2739; 90.126% identity (94.118% similar) in 476 aa overlap (1-476:1-469) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|114 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSELLFDKSTMRRPFGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS 250 260 270 280 290 300 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA 310 320 330 340 350 360 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN :::::::::::::::::::::: ::.:: ....:. . .. : :: . . .. gi|114 EQKEDFSGMNGDLEEEGGREATXXPEKVETKKEYQDQEDK--EICG----ENKRTEKVIS 370 380 390 400 410 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA .:..: : :. : : . :::::::::::::::::::::::::::::::::: gi|114 GEISLFLACSSMSD-PGVGYSSADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA 420 430 440 450 460 >>gi|74004140|ref|XP_853515.1| PREDICTED: similar to Dou (505 aa) initn: 2748 init1: 2619 opt: 2619 Z-score: 2662.7 bits: 502.1 E(): 1.3e-139 Smith-Waterman score: 2619; 86.551% identity (94.794% similar) in 461 aa overlap (1-461:45-505) 10 20 30 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYA :: .::::::::::::::::::::::::.: gi|740 HAATSRCAREAASSSGSSPEKPAGRVLTGRMSCTSARSSHLSQPVVKSVLVYRNGDPFFA 20 30 40 50 60 70 40 50 60 70 80 90 KIAA11 GRRVVIHEKKVSSFEVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGG ::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::::: gi|740 GRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQLQSGGNYVAGG 80 90 100 110 120 130 100 110 120 130 140 150 KIAA11 QEAFKKLNYLDIGEIKKRPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLI ::::::::::::::.:::::::.:::::::.::::::::::::::::::::::::::::: gi|740 QEAFKKLNYLDIGEMKKRPMEVINTEVKPVMHSRINVSARFRKPLQEPCTIFLIANGDLI 140 150 160 170 180 190 160 170 180 190 200 210 KIAA11 NPASRLLIPRKTLNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAV .:::::::::::::::::::::::::::::.:::::::::::: :::::::::::::::: gi|740 SPASRLLIPRKTLNQWDHVLQMVTEKITLRTGAVHRLYTLEGKPVESGAELENGQFYVAV 200 210 220 230 240 250 220 230 240 250 260 270 KIAA11 GRDKFKKLPYGELLFDKSTMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSS ::::::::::. :::::::::: .:::::::::::::::::::::::.::::::::::.: gi|740 GRDKFKKLPYSGLLFDKSTMRRSYGQKASSLPPIVGSRKSKGSGNDRQSKSTVGSSDNTS 260 270 280 290 300 310 280 290 300 310 320 330 KIAA11 PQPLKRKGKKEDVNSEKLTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQED ::: ::::.::.:. :: : :::::::.: .: ::::::.::::::::::::::::::: gi|740 PQPPKRKGRKEEVSLEKPKKGKQNVKLKKSAQTSPNSDEGVFKAGAERSETRGAAEVQED 320 330 340 350 360 370 340 350 360 370 380 390 KIAA11 EDTQVEVPVDQRPAEIVDEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEE ::::::.::::::::::::::::::::::::::::: ::::..:: : :::.: :.::: gi|740 EDTQVEIPVDQRPAEIVDEEEDGEKANKDAEQKEDFLGMNGEVEEGGDLEATEASEEVEE 380 390 400 410 420 430 400 410 420 430 440 450 KIAA11 ILDHSEQQARPARVNGGTDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRP . :: :. : :.: ::::::::::::.::..::: ..:.. ::::::.::.:::.: ::: gi|740 VPDHREEPAGPTRGNGGTDEENGEELDQVTTELQEAVDEDVKSQGAGTGQNEADLDHQRP 440 450 460 470 480 490 460 470 KIAA11 PRPEVKITSPEENENNQQNKDYAAVA ::::::::::. gi|740 PRPEVKITSPQ 500 >>gi|149031521|gb|EDL86488.1| doublecortin domain contai (475 aa) initn: 1721 init1: 1721 opt: 2594 Z-score: 2637.7 bits: 497.4 E(): 3.2e-138 Smith-Waterman score: 2594; 82.773% identity (95.378% similar) in 476 aa overlap (1-476:1-475) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :.: : ::::::::::::::::::::::.:::::::::::::::..:::::::::::::: gi|149 MNGPSPRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDIFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV ::::::::::::::::::::.::::::::::::::::::::::::::::::.:::::::: gi|149 AVRNIYTPRTGHRIRKLDQIESGGNYVAGGQEAFKKLNYLDIGEIKKRPMEAVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR :::.::::::::: :.::::::::::::::.::::::::::.:::::::::::::::::: gi|149 IHSKINVSARFRKALHEPCTIFLIANGDLISPASRLLIPRKALNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::::::::::::::::::::::::.:::.:::::::.::::.:::::: gi|149 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDKSAMRRPYGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::.::::::::::: :.::::.::::::::::::::::: : :::: ::.::.:: ::: gi|149 LPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEKPTKVKQSVKSKNS 250 260 270 280 290 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA ...::..::::::::::::::::::::::::::::::::::::::::::::::::..::: gi|149 HQAIPDNDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN .::.:::.:::. :...: ...::::. : : :..:..: :.::::::::::::::.::. gi|149 NQKDDFSAMNGEAEDRAGSKVADAPEEEEGIPDQGEKKASPSRVNGGTDEENGEELDQVT 360 370 380 390 400 410 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA .::: ..:.. :..: .:.:::: .: :::::::: .:::.:::.:..:: .::: gi|149 EELQPTVDEKGKAEGDNSAQDEAGLDAQRPPRPEVTVTSPQENEGNESNKASSAVA 420 430 440 450 460 470 >>gi|56205629|emb|CAI24561.1| doublecortin domain contai (475 aa) initn: 1765 init1: 1716 opt: 2583 Z-score: 2626.5 bits: 495.4 E(): 1.3e-137 Smith-Waterman score: 2583; 82.983% identity (94.118% similar) in 476 aa overlap (1-476:1-475) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :.: :.::::::::::::::::::::::.:::::::::::::::.::::::::::::::: gi|562 MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV ::::::::::::::::::::.::::::::: ::::::::::::::::::::.:::::::: gi|562 AVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKKRPMEAVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR ::::::::::::: :.::::::::::::::.::::::::.:.:::::::::::::::::: gi|562 IHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::::::::::::::::::::::::.:::.:::::::.::::.:::::: gi|562 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDKSAMRRPYGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::.::::::::::: :.::::.::::::::::::::::: : :::: ::.::.:: :.: gi|562 LPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEKPTKVKQSVKSKTS 250 260 270 280 290 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA ...::.. :::::::::::::::::::::::::::::::::::::::::::::::..::: gi|562 HQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN .::::::.:::. :..:: .:. . :: : : ::.:..: :.::::::::::::::.:: gi|562 NQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKASPSRVNGGTDEENGEELDQVA 360 370 380 390 400 410 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA .::: . :.. :..: .:::::: .: :::::::: .:::.:::.:. :: .::: gi|562 EELQSTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEANKASSAVA 420 430 440 450 460 470 >>gi|71153322|sp|Q5DU00.2|DCDC2_MOUSE RecName: Full=Doub (475 aa) initn: 1765 init1: 1716 opt: 2578 Z-score: 2621.4 bits: 494.4 E(): 2.6e-137 Smith-Waterman score: 2578; 82.773% identity (94.118% similar) in 476 aa overlap (1-476:1-475) 10 20 30 40 50 60 KIAA11 MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFG :.: :.::::::::::::::::::::::.:::::::::::::::.::::::::::::::: gi|711 MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFG 10 20 30 40 50 60 70 80 90 100 110 120 KIAA11 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKPV ::::::::::::::::::::.::::::::: ::::::::::::::::::::.:::::::: gi|711 AVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKKRPMEAVNTEVKPV 70 80 90 100 110 120 130 140 150 160 170 180 KIAA11 IHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLR ::::::::::::: :.::::::::::::::.::::::::.:.:::::::::::::::::: gi|711 IHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLR 130 140 150 160 170 180 190 200 210 220 230 240 KIAA11 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELLFDKSTMRRPFGQKASS ::::::::::::::::::::::::::::::::::::.:::.:::::::.::::.:::::: gi|711 SGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDKSAMRRPYGQKASS 190 200 210 220 230 240 250 260 270 280 290 300 KIAA11 LPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNS :::.::::::::::: :.::::.::::::::::::::::: : :::: ::.::.:: :.: gi|711 LPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKK-DSNSEKPTKVKQSVKSKTS 250 260 270 280 290 310 320 330 340 350 360 KIAA11 QETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKANKDA ...::.. :::::::::::::::::::::::::::::::::::::::::::::::..::: gi|711 HQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA11 EQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDEENGEELQQVN .::::::.:::. :..:: .:. . :: : : ::.:... :.::::::::::::::.:: gi|711 NQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDEENGEELDQVA 360 370 380 390 400 410 430 440 450 460 470 KIAA11 NELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQNKDYAAVA .::: . :.. :..: .:::::: .: :::::::: .:::.:::.:. :: .::: gi|711 EELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEANKASSAVA 420 430 440 450 460 470 476 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 22:50:30 2009 done: Tue Mar 3 22:55:03 2009 Total Scan time: 1571.430 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]