# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hj01067.fasta.nr -Q ../query/KIAA1160.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1160, 351 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824637 sequences Expectation_n fit: rho(ln(x))= 5.8343+/-0.000192; mu= 8.1653+/- 0.011 mean_var=102.3768+/-19.852, 0's: 29 Z-trim: 38 B-trim: 381 in 2/65 Lambda= 0.126757 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|97053737|sp|Q9ULR0.2|ISY1_HUMAN RecName: Full=P ( 331) 2192 410.8 1.9e-112 gi|73984510|ref|XP_849089.1| PREDICTED: similar to ( 331) 2087 391.6 1.2e-106 gi|109098078|ref|XP_001094091.1| PREDICTED: simila ( 362) 1993 374.5 1.9e-101 gi|149728235|ref|XP_001488868.1| PREDICTED: simila ( 285) 1837 345.9 6e-93 gi|97053782|sp|Q69ZQ2.2|ISY1_MOUSE RecName: Full=P ( 285) 1833 345.1 1e-92 gi|73984508|ref|XP_541743.2| PREDICTED: similar to ( 285) 1832 344.9 1.1e-92 gi|12857516|dbj|BAB31028.1| unnamed protein produc ( 285) 1829 344.4 1.7e-92 gi|81884561|sp|Q6AYB3.1|ISY1_RAT RecName: Full=Pre ( 284) 1816 342.0 8.6e-92 gi|119914938|ref|XP_001251393.1| PREDICTED: simila ( 284) 1782 335.8 6.4e-90 gi|126336520|ref|XP_001378421.1| PREDICTED: simila ( 396) 1687 318.5 1.4e-84 gi|50754283|ref|XP_414311.1| PREDICTED: hypothetic ( 280) 1654 312.4 7.1e-83 gi|38174132|gb|AAH61420.1| Hypothetical protein MG ( 282) 1586 300.0 3.9e-79 gi|89268274|emb|CAJ81535.1| novel protein similar ( 282) 1582 299.2 6.5e-79 gi|49117069|gb|AAH72869.1| MGC80278 protein [Xenop ( 284) 1582 299.2 6.6e-79 gi|133777418|gb|AAI15266.1| Rab43 protein [Danio r ( 285) 1532 290.1 3.7e-76 gi|119599688|gb|EAW79282.1| hCG2022580, isoform CR ( 226) 1497 283.6 2.7e-74 gi|119599686|gb|EAW79280.1| hCG2022580, isoform CR ( 226) 1489 282.1 7.3e-74 gi|210096514|gb|EEA44658.1| hypothetical protein B ( 277) 1303 248.2 1.5e-63 gi|215491630|gb|EEC01271.1| conserved hypothetical ( 292) 1296 246.9 3.7e-63 gi|156224573|gb|EDO45398.1| predicted protein [Nem ( 282) 1251 238.7 1.1e-60 gi|198432969|ref|XP_002129141.1| PREDICTED: simila ( 280) 1198 229.0 9e-58 gi|91090798|ref|XP_970469.1| PREDICTED: similar to ( 274) 1190 227.5 2.4e-57 gi|47212428|emb|CAF93584.1| unnamed protein produc ( 366) 1187 227.1 4.4e-57 gi|119599687|gb|EAW79281.1| hCG2022580, isoform CR ( 180) 1157 221.3 1.2e-55 gi|108876902|gb|EAT41127.1| conserved hypothetical ( 274) 1112 213.3 4.8e-53 gi|194152034|gb|EDW67468.1| GJ23062 [Drosophila vi ( 274) 1105 212.0 1.2e-52 gi|167879286|gb|EDS42669.1| pre-mRNA-splicing fact ( 276) 1104 211.8 1.3e-52 gi|194102604|gb|EDW24647.1| GL23279 [Drosophila pe ( 274) 1099 210.9 2.5e-52 gi|193915613|gb|EDW14480.1| GI24285 [Drosophila mo ( 273) 1098 210.7 2.8e-52 gi|194170017|gb|EDW84918.1| GK12885 [Drosophila wi ( 275) 1096 210.3 3.6e-52 gi|193894470|gb|EDV93336.1| GH19249 [Drosophila gr ( 273) 1094 210.0 4.7e-52 gi|190652714|gb|EDV49969.1| GG17474 [Drosophila er ( 272) 1089 209.0 8.8e-52 gi|19527549|gb|AAL89889.1| RE31520p [Drosophila me ( 272) 1084 208.1 1.7e-51 gi|194200235|gb|EDX13811.1| GD20890 [Drosophila si ( 272) 1080 207.4 2.7e-51 gi|190627488|gb|EDV43012.1| GF18268 [Drosophila an ( 273) 1079 207.2 3.1e-51 gi|194121033|gb|EDW43076.1| GM26367 [Drosophila se ( 272) 1075 206.5 5.2e-51 gi|210119085|gb|EEA66812.1| hypothetical protein B ( 220) 1032 198.5 1e-48 gi|156543896|ref|XP_001607041.1| PREDICTED: simila ( 259) 1026 197.5 2.5e-48 gi|157017633|gb|EAA44738.3| AGAP004225-PA [Anophel ( 241) 969 187.1 3.2e-45 gi|193603611|ref|XP_001952419.1| PREDICTED: simila ( 275) 965 186.4 5.9e-45 gi|190585851|gb|EDV25919.1| hypothetical protein T ( 258) 951 183.8 3.3e-44 gi|212515745|gb|EEB17835.1| conserved hypothetical ( 168) 944 182.4 5.9e-44 gi|188529323|gb|ACD62407.1| ISY1 splicing factor-l ( 237) 943 182.3 8.6e-44 gi|148666811|gb|EDK99227.1| RIKEN cDNA 5830446M03, ( 141) 930 179.7 3.1e-43 gi|13938521|gb|AAH07409.1| ISY1 protein [Homo sapi ( 307) 931 180.2 4.8e-43 gi|162675655|gb|EDQ62148.1| predicted protein [Phy ( 292) 910 176.3 6.6e-42 gi|18490441|gb|AAH22597.1| Isy1 protein [Mus muscu ( 146) 903 174.8 9.6e-42 gi|221127654|ref|XP_002160972.1| PREDICTED: simila ( 274) 903 175.0 1.5e-41 gi|158588989|gb|EDP28167.1| Isy1-like splicing fam ( 262) 885 171.7 1.5e-40 gi|56756278|gb|AAW26314.1| SJCHGC02438 protein [Sc ( 379) 823 160.5 4.9e-37 >>gi|97053737|sp|Q9ULR0.2|ISY1_HUMAN RecName: Full=Pre-m (331 aa) initn: 2192 init1: 2192 opt: 2192 Z-score: 2174.9 bits: 410.8 E(): 1.9e-112 Smith-Waterman score: 2192; 100.000% identity (100.000% similar) in 331 aa overlap (21-351:1-331) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|970 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM 290 300 310 320 330 >>gi|73984510|ref|XP_849089.1| PREDICTED: similar to CG9 (331 aa) initn: 2087 init1: 2087 opt: 2087 Z-score: 2071.1 bits: 391.6 E(): 1.2e-106 Smith-Waterman score: 2087; 96.073% identity (97.583% similar) in 331 aa overlap (21-351:1-331) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|739 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE ::::::::::::::::::::.:: :::::::::::::::::::::::::::::::::::: gi|739 GYLDEDDGVIVPLEQEYEKKFRAGLVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::::::::.:.::::::::::::::::::::::::::::::::::::::::::::. gi|739 ESDEEGSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::::::::. ::: :::::::::::: ::: :::::::: : ::::::: gi|739 RLLGCRSGTQLARSDSAPSPRATTAVPTGPSSLTTSPRGAPFCLCLTGLRM 290 300 310 320 330 >>gi|109098078|ref|XP_001094091.1| PREDICTED: similar to (362 aa) initn: 1993 init1: 1993 opt: 1993 Z-score: 1977.7 bits: 374.5 E(): 1.9e-101 Smith-Waterman score: 1993; 99.671% identity (100.000% similar) in 304 aa overlap (1-304:58-361) 10 20 30 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMT :::::::::::::::::::::::::::::: gi|109 SGPFLLRFRQNISVCGQLESSVPVSVGIFWACGVSWTGAAGLQDGALSDTMARNAEKAMT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 ALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 RDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLP 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 GVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWK 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 AEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGDDSQQKFIAHVPVPSQQE ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 AEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGDDGQQKFIAHVPVPSQQE 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 IEEALVRRKKMELLQKYASETLQAQSEEARRLLGCRSGTRPARSGSAPSPRATTAVPMGP :::::::::::::::::::::::::::::::::: gi|109 IEEALVRRKKMELLQKYASETLQAQSEEARRLLGY 330 340 350 360 340 350 KIAA11 SLPTTSPRGAPSCRCLTGLRM >>gi|149728235|ref|XP_001488868.1| PREDICTED: similar to (285 aa) initn: 1837 init1: 1837 opt: 1837 Z-score: 1824.9 bits: 345.9 E(): 6e-93 Smith-Waterman score: 1837; 98.592% identity (99.648% similar) in 284 aa overlap (21-304:1-284) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|149 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR :::::: :::::.:.::::::::::::::::::::::::::::::::::::::::::::. gi|149 ESDEEGIQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::: gi|149 RLLGY >>gi|97053782|sp|Q69ZQ2.2|ISY1_MOUSE RecName: Full=Pre-m (285 aa) initn: 1833 init1: 1833 opt: 1833 Z-score: 1820.9 bits: 345.1 E(): 1e-92 Smith-Waterman score: 1833; 98.239% identity (100.000% similar) in 284 aa overlap (21-304:1-284) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|970 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|970 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::.:::.:.:.::::::::::::::::::::::::::::::::::::::::::::. gi|970 ESDEEGNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::: gi|970 RLLGY >>gi|73984508|ref|XP_541743.2| PREDICTED: similar to CG9 (285 aa) initn: 1832 init1: 1832 opt: 1832 Z-score: 1819.9 bits: 344.9 E(): 1.1e-92 Smith-Waterman score: 1832; 98.239% identity (99.648% similar) in 284 aa overlap (21-304:1-284) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|739 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE ::::::::::::::::::::.:: :::::::::::::::::::::::::::::::::::: gi|739 GYLDEDDGVIVPLEQEYEKKFRAGLVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::::::::.:.::::::::::::::::::::::::::::::::::::::::::::. gi|739 ESDEEGSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::: gi|739 RLLGY >>gi|12857516|dbj|BAB31028.1| unnamed protein product [M (285 aa) initn: 1829 init1: 1829 opt: 1829 Z-score: 1817.0 bits: 344.4 E(): 1.7e-92 Smith-Waterman score: 1829; 97.887% identity (100.000% similar) in 284 aa overlap (21-304:1-284) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|128 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|128 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVKELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::.:::.:.:.::::::::::::::::::::::::::::::::::::::::::::. gi|128 ESDEEGNQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 230 240 250 260 270 280 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::: gi|128 RLLGY >>gi|81884561|sp|Q6AYB3.1|ISY1_RAT RecName: Full=Pre-mRN (284 aa) initn: 1395 init1: 1395 opt: 1816 Z-score: 1804.2 bits: 342.0 E(): 8.6e-92 Smith-Waterman score: 1816; 97.887% identity (99.648% similar) in 284 aa overlap (21-304:1-283) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|818 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::.:::::::::::::::::::::::::::::: ::::::::: gi|818 GYLDEDDGVIVPLEQEYEKRLRAELVEKWKAEREARLARGEKEEEEEEEE-INIYAVTEE 170 180 190 200 210 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::::::.:.:.::::::::::::::::::::::::::::::::::::::::::::. gi|818 ESDEEGSQEKAGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAK 220 230 240 250 260 270 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM :::: gi|818 RLLGY 280 >>gi|119914938|ref|XP_001251393.1| PREDICTED: similar to (284 aa) initn: 1454 init1: 1373 opt: 1782 Z-score: 1770.6 bits: 335.8 E(): 6.4e-90 Smith-Waterman score: 1782; 95.088% identity (98.246% similar) in 285 aa overlap (21-305:1-284) 10 20 30 40 50 60 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP :::::::::::::::::::::::::::::::::::::::: gi|119 MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELP 10 20 30 40 70 80 90 100 110 120 KIAA11 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYG 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYY 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 GYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEE :::::::::::::::::::. :::::::::::::::::::: ::: :::::.:::::.:: gi|119 GYLDEDDGVIVPLEQEYEKRHRAELVEKWKAEREARLARGE-EEEGEEEEEVNIYAVAEE 170 180 190 200 210 250 260 270 280 290 300 KIAA11 ESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEAR ::::::. . ::.:..:::::::::::::::::::::::::::::::.:::::::::::: gi|119 ESDEEGGPDGGGEDGRQKFIAHVPVPSQQEIEEALVRRKKMELLQKYTSETLQAQSEEAR 220 230 240 250 260 270 310 320 330 340 350 KIAA11 RLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM ::::: gi|119 RLLGC 280 >>gi|126336520|ref|XP_001378421.1| PREDICTED: similar to (396 aa) initn: 1314 init1: 1314 opt: 1687 Z-score: 1674.7 bits: 318.5 E(): 1.4e-84 Smith-Waterman score: 1687; 88.396% identity (95.563% similar) in 293 aa overlap (12-304:108-395) 10 20 30 40 KIAA11 ACGVSWTGAAGLQDGALSDTMARNAEKAMTALARFRQAQLE ...: :. .:::::::::::::::::::: gi|126 WRNTVDWCPKSLDRERMIECQRLQRSRRLRIEEGPLD--LARNAEKAMTALARFRQAQLE 80 90 100 110 120 130 50 60 70 80 90 100 KIAA11 EGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLL :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|126 EGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLL 140 150 160 170 180 190 110 120 130 140 150 160 KIAA11 REKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 REKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPL 200 210 220 230 240 250 170 180 190 200 210 220 KIAA11 PPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGE ::::::::::::::: ::::: :::::.. :::::.:::. :: :::::::::::::::. gi|126 PPPRKTRAELMKAIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKAEREARLARGD 260 270 280 290 300 310 230 240 250 260 270 280 KIAA11 KEEEEEEEEEINIYAVTEEESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKM :::::: :::::::...:::::...:: :...:::::::::::::::::::::::::: gi|126 KEEEEE---EINIYAVNDDESDEESAKEKEGEEGQQKFIAHVPVPSQQEIEEALVRRKKM 320 330 340 350 360 370 290 300 310 320 330 340 KIAA11 ELLQKYASETLQAQSEEARRLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAP ::::::::::: ::::::.:::: gi|126 ELLQKYASETLLAQSEEAKRLLGF 380 390 351 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 23:23:48 2009 done: Tue Mar 3 23:28:44 2009 Total Scan time: 1457.300 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]