# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hj05329.fasta.nr -Q ../query/KIAA1163.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1163, 437 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7812654 sequences Expectation_n fit: rho(ln(x))= 5.0723+/-0.000186; mu= 11.7545+/- 0.010 mean_var=75.8642+/-14.459, 0's: 30 Z-trim: 104 B-trim: 0 in 0/66 Lambda= 0.147250 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|68052342|sp|Q86WK6.1|AMGO1_HUMAN RecName: Full= ( 493) 2951 636.3 4.9e-180 gi|26454838|gb|AAH40879.1| Adhesion molecule with ( 493) 2945 635.0 1.2e-179 gi|73959931|ref|XP_547241.2| PREDICTED: similar to ( 493) 2848 614.4 1.9e-173 gi|154426022|gb|AAI51606.1| AMIGO1 protein [Bos ta ( 493) 2842 613.1 4.6e-173 gi|149708710|ref|XP_001494891.1| PREDICTED: simila ( 493) 2819 608.2 1.4e-171 gi|68052335|sp|Q80ZD8.1|AMGO1_MOUSE RecName: Full= ( 492) 2690 580.8 2.4e-163 gi|123122751|emb|CAM27258.1| adhesion molecule wit ( 626) 2690 580.9 2.9e-163 gi|68051983|sp|Q80ZD7.1|AMGO1_RAT RecName: Full=Am ( 493) 2676 577.9 1.9e-162 gi|126311541|ref|XP_001381944.1| PREDICTED: simila ( 493) 2323 502.9 7.1e-140 gi|189522545|ref|XP_001924023.1| PREDICTED: si:ch2 ( 491) 1562 341.2 3.3e-91 gi|169146257|emb|CAQ14852.1| novel protein similar ( 490) 1557 340.1 6.8e-91 gi|47228771|emb|CAG07503.1| unnamed protein produc ( 505) 1534 335.3 2.1e-89 gi|123122753|emb|CAM27260.1| adhesion molecule wit ( 309) 1392 304.9 1.7e-80 gi|47229631|emb|CAG06827.1| unnamed protein produc ( 488) 1233 271.3 3.6e-70 gi|157676677|emb|CAP07973.1| si:ch211-199o1.9 [Dan ( 368) 1124 248.0 2.7e-63 gi|112418608|gb|AAI21982.1| Adhesion molecule with ( 488) 879 196.1 1.6e-47 gi|169154896|emb|CAQ14854.1| novel protein similar ( 488) 674 152.6 2e-34 gi|148725834|emb|CAN88395.1| novel protein similar ( 486) 670 151.7 3.6e-34 gi|111120278|gb|ABH06324.1| amphoterin induced gen ( 387) 640 145.2 2.5e-32 gi|76663289|ref|XP_592100.2| PREDICTED: adhesion m ( 521) 640 145.4 3.1e-32 gi|68052338|sp|Q86SJ2.1|AMGO2_HUMAN RecName: Full= ( 522) 624 142.0 3.3e-31 gi|68052306|sp|Q5R7M3.1|AMGO2_PONAB RecName: Full= ( 522) 624 142.0 3.3e-31 gi|193787207|dbj|BAG52413.1| unnamed protein produ ( 522) 624 142.0 3.3e-31 gi|29027428|gb|AAO48951.1| transmembrane protein A ( 520) 612 139.4 1.9e-30 gi|68051979|sp|Q7TNJ4.1|AMGO2_RAT RecName: Full=Am ( 520) 612 139.4 1.9e-30 gi|149714197|ref|XP_001489729.1| PREDICTED: adhesi ( 521) 612 139.4 1.9e-30 gi|68052336|sp|Q80ZD9.1|AMGO2_MOUSE RecName: Full= ( 519) 610 139.0 2.6e-30 gi|73997063|ref|XP_543720.2| PREDICTED: similar to ( 565) 600 136.9 1.2e-29 gi|50728248|ref|XP_416052.1| PREDICTED: similar to ( 521) 595 135.8 2.4e-29 gi|149523844|ref|XP_001511860.1| PREDICTED: simila ( 514) 588 134.3 6.6e-29 gi|109039650|ref|XP_001107400.1| PREDICTED: simila ( 504) 556 127.5 7.2e-27 gi|73985503|ref|XP_850642.1| PREDICTED: similar to ( 876) 558 128.1 8.1e-27 gi|72533373|gb|AAI01366.1| Adhesion molecule with ( 504) 554 127.1 9.7e-27 gi|68052343|sp|Q86WK7.1|AMGO3_HUMAN RecName: Full= ( 504) 554 127.1 9.7e-27 gi|68052349|sp|Q8C2S7.1|AMGO3_MOUSE RecName: Full= ( 508) 544 124.9 4.2e-26 gi|68051982|sp|Q80ZD5.1|AMGO3_RAT RecName: Full=Am ( 508) 540 124.1 7.6e-26 gi|47223144|emb|CAG11279.1| unnamed protein produc ( 460) 520 119.8 1.3e-24 gi|33874717|gb|AAH14103.2| AMIGO2 protein [Homo sa ( 277) 511 117.7 3.5e-24 gi|33383063|dbj|BAC81188.1| alivin 1 [Homo sapiens ( 283) 511 117.7 3.5e-24 gi|26324562|dbj|BAC26035.1| unnamed protein produc ( 243) 443 103.2 7e-20 gi|149496424|ref|XP_001513914.1| PREDICTED: simila ( 140) 436 101.5 1.3e-19 gi|47205597|emb|CAF91400.1| unnamed protein produc ( 299) 435 101.6 2.7e-19 gi|210102681|gb|EEA50727.1| hypothetical protein B ( 480) 370 88.0 5.4e-15 gi|210083061|gb|EEA31697.1| hypothetical protein B ( 278) 357 85.0 2.5e-14 gi|210083069|gb|EEA31705.1| hypothetical protein B ( 415) 355 84.7 4.4e-14 gi|125851929|ref|XP_695083.2| PREDICTED: similar t ( 483) 352 84.1 7.7e-14 gi|18606131|gb|AAH22907.1| Amigo1 protein [Mus mus ( 164) 344 82.0 1.1e-13 gi|172044151|sp|A4IGL7.1|PXDN_XENTR RecName: Full= (1457) 353 84.8 1.5e-13 gi|134085437|ref|NP_001076815.1| peroxidasin homol (1460) 353 84.8 1.5e-13 gi|167865298|gb|EDS28681.1| kek1 [Culex quinquefas ( 832) 350 83.9 1.6e-13 >>gi|68052342|sp|Q86WK6.1|AMGO1_HUMAN RecName: Full=Amph (493 aa) initn: 2951 init1: 2951 opt: 2951 Z-score: 3388.5 bits: 636.3 E(): 4.9e-180 Smith-Waterman score: 2951; 100.000% identity (100.000% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT :::::::::::::::::::::::::::::: gi|680 AGRAVVSCPAACLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV ::::::::::::::::::::::::::::::::::::::::::::::: gi|680 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|26454838|gb|AAH40879.1| Adhesion molecule with Ig-l (493 aa) initn: 2945 init1: 2945 opt: 2945 Z-score: 3381.6 bits: 635.0 E(): 1.2e-179 Smith-Waterman score: 2945; 99.771% identity (100.000% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT :::::::::::::::::::::::::::::: gi|264 AGRAVVSCPAACLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV :::::::.::::::::::::::::::::::::::::::::::::::: gi|264 AGPGQGQSGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|73959931|ref|XP_547241.2| PREDICTED: similar to Amp (493 aa) initn: 2848 init1: 2848 opt: 2848 Z-score: 3270.2 bits: 614.4 E(): 1.9e-173 Smith-Waterman score: 2848; 96.339% identity (99.085% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT ::::::::::::::::::::::::::::: gi|739 AGRPVVSCPAACLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLI 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .:.::::::::::::::::::::::::::::::::::::::::::.::.::::::::::: gi|739 HLQSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSELQALEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::::::::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|739 KLPAWIKNGLYLHNNPLHCDCELYQLFSHWQYRQLSSVMDFQEDLYCMSSKKLHNVFNLS 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL ::::.::::::::::::::: ::::::::::::::::::::::::::.:.::.::::::: gi|739 FLNCSEYKERAWEAHLGDTLTIKCDTKQQGMTKVWVTPSNERVLDEVANSTVTVSKDGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :::::::::::::::::::.:::::::::::.::::::::::::::::::::::::::: gi|739 HFQQVQVEDGGVYTCYAMGEAFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV :::::::::::::::::::::::::: :::::::::::::::::::: gi|739 AGPGQGQNGKLKPGNTLPVPEATGKGPRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|154426022|gb|AAI51606.1| AMIGO1 protein [Bos taurus (493 aa) initn: 2842 init1: 2842 opt: 2842 Z-score: 3263.3 bits: 613.1 E(): 4.6e-173 Smith-Waterman score: 2842; 95.881% identity (99.313% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT :::::::::::::::::::::::::::::: gi|154 AGRPVVSCPASCLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|154 HLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSELQVLEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|154 MAVDRCAFDDMTQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::::::::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|154 KLPAWIKNGLYLHNNPLHCDCELYQLFSHWQYRQLSSVMDFQEDLYCMSSKKLHNVFNLS 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL ::::.:::::::::::::.: ::::::::::::::::::::::::::.:.::.::::::: gi|154 FLNCSEYKERAWEAHLGDSLTIKCDTKQQGMTKVWVTPSNERVLDEVANSTVTVSKDGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :::::.: :::::::::::.:::::::::::.::::::::::::::::::::::::::: gi|154 HFQQVQIEHGGVYTCYAMGEAFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|154 VLIYLYLTPCRCWCRGVEKPSSHQADSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV :::.::::::::::::::::::::::::::::::::::::::::::: gi|154 AGPAQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|149708710|ref|XP_001494891.1| PREDICTED: similar to (493 aa) initn: 2819 init1: 2819 opt: 2819 Z-score: 3236.9 bits: 608.2 E(): 1.4e-171 Smith-Waterman score: 2819; 95.423% identity (98.627% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT :::::::::::::::::::::::::::::: gi|149 AGRPLVSCPAACLCASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::: gi|149 HLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSELQALEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MAVDRSAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::::::::::::::.::::::::::::::::::::::::::::::.::::::::::: gi|149 KLPAWIKNGLYLHNNPLHCDCELYQLFSHWQYRQLSSVMDFQEDLYCMSSKKLHNVFNLS 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL ::::.::::::::::::: : :::::::::::::::::.::::: ::.:.::.::::::: gi|149 FLNCSEYKERAWEAHLGDPLTIKCDTKQQGMTKVWVTPNNERVLGEVANSTVTVSKDGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :..::::::::::::::::.:::::::::::.::: ::::::::::::::::::::::: gi|149 HFEHVQVEDGGVYTCYAMGEAFNETLSVELKVYNFTSHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV ::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|68052335|sp|Q80ZD8.1|AMGO1_MOUSE RecName: Full=Amph (492 aa) initn: 2688 init1: 1562 opt: 2690 Z-score: 3088.8 bits: 580.8 E(): 2.4e-163 Smith-Waterman score: 2690; 89.931% identity (97.941% similar) in 437 aa overlap (1-437:57-492) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT .::::::::::::::::::::::::::::: gi|680 AGRSVVSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .::::::::::::::::::: :::::::::::::.:.:::::::::::.::::::::::: gi|680 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ ..::: ::.:::::::::::::::::::.::.:.: ::::: ::::::::::.::: ::: gi|680 VVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::.:::::::::::.:::.::::::::::::::::::::::::::.::::::.:.:. gi|680 KLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKKLHNIFSLD 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :.::.:::: :::::::::: :.:::::::::::::.::::.::.. .::.::: ..:.: gi|680 FFNCSEYKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL .:..::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|680 FFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV ::::::::::::::::::::::::::::::::::::::::::::::: gi|680 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|123122751|emb|CAM27258.1| adhesion molecule with Ig (626 aa) initn: 2688 init1: 1562 opt: 2690 Z-score: 3087.4 bits: 580.9 E(): 2.9e-163 Smith-Waterman score: 2690; 89.931% identity (97.941% similar) in 437 aa overlap (1-437:191-626) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT .::::::::::::::::::::::::::::: gi|123 AGRSVVSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLT 170 180 190 200 210 220 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .::::::::::::::::::: :::::::::::::.:.:::::::::::.::::::::::: gi|123 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI 230 240 250 260 270 280 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ ..::: ::.:::::::::::::::::::.::.:.: ::::: ::::::::::.::: ::: gi|123 VVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQ 290 300 310 320 330 340 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::.:::::::::::.:::.::::::::::::::::::::::::::.::::::.:.:. gi|123 KLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKKLHNIFSLD 350 360 370 380 390 400 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :.::.:::: :::::::::: :.:::::::::::::.::::.::.. .::.::: ..:.: gi|123 FFNCSEYKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDL 410 420 430 440 450 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL .:..::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|123 FFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVL 460 470 480 490 500 510 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 520 530 540 550 560 570 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV ::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 580 590 600 610 620 >>gi|68051983|sp|Q80ZD7.1|AMGO1_RAT RecName: Full=Amphot (493 aa) initn: 2676 init1: 2676 opt: 2676 Z-score: 3072.7 bits: 577.9 E(): 1.9e-162 Smith-Waterman score: 2676; 89.703% identity (97.712% similar) in 437 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT .:::.:::::::::::::::.::::::::: gi|680 AGRPVVSCPANCLCASNILSCSKQQLPNVPQSLPGYTALLDLSHNNLSRLKAEWTPTRLT 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .::::::::::::::::::: :::::::::::::.:.:::::::: ::.::::::::::: gi|680 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSGLQALEVLLLYNNHI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ ..::: ::.:::::::::::::.::::::::.:.. .:::::::::::::::.::: ::: gi|680 VVVDRNAFEDMAQLQKLYLSQNMISRFPLELIKDANRLPKLTLLDLSSNKLKKLPLTDLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS :::::.:::::::::::.:::.:::::::::::::::::::::::::..::::::::.:. gi|680 KLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCVHSKKLHNVFSLD 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :.::.:::: :::::::::: : ::::::::::::::::::.::.. .::::.::.::.: gi|680 FFNCSEYKESAWEAHLGDTLTITCDTKQQGMTKVWVTPSNEQVLNQGANGTVTVSEDGNL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :..::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|680 HFKEVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 390 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFLEP 390 400 410 420 430 440 400 410 420 430 KIAA11 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV ::::::::::::::::::::::::::::::::::::::::::::::: gi|680 AGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|126311541|ref|XP_001381944.1| PREDICTED: similar to (493 aa) initn: 2063 init1: 2063 opt: 2323 Z-score: 2667.4 bits: 502.9 E(): 7.1e-140 Smith-Waterman score: 2323; 78.082% identity (93.151% similar) in 438 aa overlap (1-437:57-493) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLT .::: :::.::::::::..:::.:: .: gi|126 TGRSLLSCPTGCLCASNILSCTKRGLSNVPQSLPRYTAFLDLSHNNLTHLRAQWTTIHLI 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 QLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHI .:.::.::::::.:::.:::.:::.:::::::::.:.:::: :::.:. :::::::.:.: gi|126 HLQSLFLSHNHLHFISTEAFTPVPGLRYLDLSSNHLKTLDESLFSELKNLEVLLLYSNQI 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 MAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQ . ::: :::::..:::::::::::.:::.::::. .:::.:::::::::::: :: ::: gi|126 VEVDRSAFDDMVNLQKLYLSQNQIARFPVELVKDRSKLPSLTLLDLSSNKLKLLPTADLQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA11 KLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMNSKKLHNVFNLS ::::.::::::::: :.::::. .::.:::::::::: ::::::::: :::...:::.. gi|126 DLPAWMKNGLYLHNNSLSCDCEIQKLFTHWQYRQLSSVTDFQEDLYCMYSKKMYSVFNIT 210 220 230 240 250 260 220 230 240 250 260 270 KIAA11 FLNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSL :::.:.:: :.::.::..:::.:::::::::: ::::.::.::.:: ::::.: ..::: gi|126 TLNCSEFKECAFEAYLGESLIISCDTKQQGMTKEWVTPNNEKVLNEVGNGTVKVLQNGSL 270 280 290 300 310 320 280 290 300 310 320 330 KIAA11 LFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVL :....::: :.:::::.::.::::::::.:::::: :: :::::::::::::::::::: gi|126 QFEHIRVEDQGLYTCYAVGEAFNETLSVEVKVHNFTRHGPHDTLNTAYTTLVGCILSVVL 330 340 350 360 370 380 340 350 360 370 380 KIAA11 VLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGD-KDDGFDRRVAFLE :::::::::::::::. :.:.:::::::::::::::::::::::: ::.:::::::::: gi|126 VLIYLYLTPCRCWCRAGERPTSHQGDSLSSSMLSTTPNHDPMAGGGGKDSGFDRRVAFLE 390 400 410 420 430 440 390 400 410 420 430 KIAA11 PAGPGQGQNGKLKPGNTLPVPEATGKGQRRMSDPESVSSVFSDTPIVV :.::::::::::::::::::::.. ::::.:::::::::::::::::: gi|126 PTGPGQGQNGKLKPGNTLPVPEGA-KGQRKMSDPESVSSVFSDTPIVV 450 460 470 480 490 >>gi|189522545|ref|XP_001924023.1| PREDICTED: si:ch211-1 (491 aa) initn: 1384 init1: 845 opt: 1562 Z-score: 1793.8 bits: 341.2 E(): 3.3e-91 Smith-Waterman score: 1562; 56.916% identity (80.045% similar) in 441 aa overlap (3-437:57-491) 10 20 30 KIAA11 HSLPSYTALLDLSHNNLSRLRAEWTPTRLTQL ::.:::.::.: :... :::.:: .: .: gi|189 GSTLNCHKMCICASNIVSCSKMNLTMIPSDLPNYTAVLDISFNEITGLRAQWTKHKLPNL 30 40 50 60 70 80 40 50 60 70 80 90 KIAA11 HSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLLYNNHIMA :.:::::: :.::::::: : .::::::::: :: ::::.: : ::::::::::: gi|189 HNLLLSHNGLSFISSEAFIFVKQLRYLDLSSNVLRQLDEFIFEPLIHLEVLLLYNNHISQ 90 100 110 120 130 140 100 110 120 130 140 150 KIAA11 VDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKLKNLPLPDLQKL .:: :: ...::::::::: .:::::::::. .: ::.:::::::..: ::. ::: : gi|189 IDRTAFLGLGSLQKLYLSQNLVSRFPLELVKDKNRLDKLSLLDLSSNRIKVLPIQDLQAL 150 160 170 180 190 200 160 170 180 190 200 KIAA11 PAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYCMN---SKKLHNVFNL ::.::::::.::: : ::::::.:..::. :.:.:..::..: :.. .:.. ...: gi|189 PAYIKNGLYFHNNTLICDCELYSLMAHWNIRRLNSALDFKDDHTCVHPGPDKRVLRLYEL 210 220 230 240 250 260 210 220 230 240 250 260 KIAA11 SF-LNCGEYKERAWEAHLGDTLIIKCDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDG .. .::. .:: ::.: .:::. :::... :.:.:. :.: :.. .: .. : :: gi|189 NIHMNCSTFKETDREAYLEQTLILDCDTRHREMSKTWMLPGNV-VVSPGNNLSAVVLPDG 270 280 290 300 310 320 270 280 290 300 310 320 KIAA11 SLLFQQVQVEDGGVYTCYAMGETFNETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSV .: .. .. ::.:::::.:..: .:::: : .:::::::.:. :::::::::::::. :: gi|189 DLELKTIRPEDSGVYTCFAVSEYLNETLYVVVKVHNFTLNGNGDTLNTAYTTLVGCLASV 330 340 350 360 370 380 330 340 350 360 370 380 KIAA11 VLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLSTTPNHDPMAGGDKDDGFDRRVAFL ::::::::::::::.: .: ..:. ::. :::::.::.:. :: : . ..:.:::. gi|189 VLVLIYLYLTPCRCFCCP-DKSKNHHEDSIHSSMLSVTPTHEDMA--TKAE-LNRHVAFI 390 400 410 420 430 440 390 400 410 420 430 KIAA11 EPAGPGQGQNGKLKPGNTLPVPEAT--GKGQRRMSDPESVSSVFSDTPIVV .: ::::::..:.. : : . :::.:. : .:.::::::::::: gi|189 DPKDL-QGQNGKVNPNGDEEVDEEAMQGKGKRKKSVADSISSVFSDTPIVV 450 460 470 480 490 437 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 23:39:09 2009 done: Tue Mar 3 23:43:34 2009 Total Scan time: 1483.680 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]