hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-20200494/chunk_1/iprscan-20080501-20200494.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1207 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00168.20.fs C2 domain 391.7 6.8e-116 8 PF00168.20.ls C2 domain 386.9 2.8e-113 6 PF08151.2.fs FerI (NUC094) domain 194.2 1.1e-60 1 PF08150.2.fs FerB (NUC096) domain 201.4 2.1e-58 1 PF08150.2.ls FerB (NUC096) domain 203.4 4.9e-58 1 PF08151.2.ls FerI (NUC094) domain 196.2 7e-56 1 PF08165.2.ls FerA (NUC095) domain 130.1 5.8e-36 1 PF08165.2.fs FerA (NUC095) domain 128.1 2.3e-35 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00168.20.fs 1/8 2 85 .. 1 88 [] 78.8 7.1e-23 PF00168.20.ls 1/6 2 85 .. 1 88 [] 80.7 4.1e-21 PF00168.20.ls 2/6 201 281 .. 1 88 [] 55.2 2e-13 PF00168.20.fs 2/8 201 281 .. 1 88 [] 53.3 2.7e-15 PF08151.2.ls 1/1 282 353 .. 1 72 [] 196.2 7e-56 PF08151.2.fs 1/1 282 353 .. 1 72 [] 194.2 1.1e-60 PF00168.20.ls 3/6 360 458 .. 1 88 [] 80.7 4.3e-21 PF00168.20.fs 3/8 360 458 .. 1 88 [] 78.7 7.6e-23 PF08165.2.fs 1/1 676 741 .. 1 67 [] 128.1 2.3e-35 PF08165.2.ls 1/1 676 741 .. 1 67 [] 130.1 5.8e-36 PF08150.2.ls 1/1 768 843 .. 1 79 [] 203.4 4.9e-58 PF08150.2.fs 1/1 768 843 .. 1 79 [] 201.4 2.1e-58 PF00168.20.fs 4/8 1141 1231 .. 1 88 [] 70.5 2.1e-20 PF00168.20.ls 4/6 1141 1231 .. 1 88 [] 72.4 1.3e-18 PF00168.20.fs 5/8 1303 1393 .. 1 88 [] 18.0 8.1e-05 PF00168.20.ls 5/6 1303 1393 .. 1 88 [] 20.0 0.0038 PF00168.20.ls 6/6 1555 1638 .. 1 88 [] 77.8 3.1e-20 PF00168.20.fs 6/8 1555 1638 .. 1 88 [] 75.9 5.2e-22 Alignments of top-scoring domains: PF00168.20.fs: domain 1 of 8, from 2 to 85: score 78.8, E = 7.1e-23 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl LrV v +A n p++ +gk+DP V v + + kkkTk +++ l KIAA1207 2 LRVIVESASNIPKTK--FGKPDPIVSVIFKD----EKKKTKKVDNEL 42 NPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* NPvWNE ++F++ +l+++++L i V+D+ ++g ++++G+++ KIAA1207 43 NPVWNEILEFDLRGIPLDFssSLGIIVKDFETIGQNKLIGTAT 85 PF00168.20.ls: domain 1 of 6, from 2 to 85: score 80.7, E = 4.1e-21 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl LrV v +A n p++ +gk+DP V v + + kkkTk +++ l KIAA1207 2 LRVIVESASNIPKTK--FGKPDPIVSVIFKD----EKKKTKKVDNEL 42 NPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* NPvWNE ++F++ +l+++++L i V+D+ ++g ++++G+++ KIAA1207 43 NPVWNEILEFDLRGIPLDFssSLGIIVKDFETIGQNKLIGTAT 85 PF00168.20.ls: domain 2 of 6, from 201 to 281: score 55.2, E = 2e-13 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +rV+vie++ L n + P Vkv++ g q+++T++++++ KIAA1207 201 IRVRVIEGRQLSG----N-NIRPVVKVHVCG----QTHRTRIKRGN- 237 NPvWNEtFtFevpppdlqe...tLeieVyDydrfgrddflGevs<-* NP ++E F ++v+ + + ++++ i Vy++ +++ d ++Ge++ KIAA1207 238 NPFFDELFFYNVNMTPSELmdeIISIRVYNSHSLRADCLMGEFK 281 PF00168.20.fs: domain 2 of 8, from 201 to 281: score 53.3, E = 2.7e-15 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +rV+vie++ L n + P Vkv++ g q+++T++++++ KIAA1207 201 IRVRVIEGRQLSG----N-NIRPVVKVHVCG----QTHRTRIKRGN- 237 NPvWNEtFtFevpppdlqe...tLeieVyDydrfgrddflGevs<-* NP ++E F ++v+ + + ++++ i Vy++ +++ d ++Ge++ KIAA1207 238 NPFFDELFFYNVNMTPSELmdeIISIRVYNSHSLRADCLMGEFK 281 PF08151.2.ls: domain 1 of 1, from 282 to 353: score 196.2, E = 7e-56 *->lDvGtVYdePeHafmrKWlLLsDPdDfsaGaKGYLKvsmfVvGkGDe +DvG+VYdeP+Ha+mrKWlLL+DP+D+s+G KGY+KvsmfV+G+GDe KIAA1207 282 IDVGFVYDEPGHAVMRKWLLLNDPEDTSSGSKGYMKVSMFVLGTGDE 328 ppvekKdseeDkDDIEsNLLLPaGV<-* pp+e++d+++D+DD+EsNLLLPaG+ KIAA1207 329 PPPERRDRDNDSDDVESNLLLPAGI 353 PF08151.2.fs: domain 1 of 1, from 282 to 353: score 194.2, E = 1.1e-60 *->lDvGtVYdePeHafmrKWlLLsDPdDfsaGaKGYLKvsmfVvGkGDe +DvG+VYdeP+Ha+mrKWlLL+DP+D+s+G KGY+KvsmfV+G+GDe KIAA1207 282 IDVGFVYDEPGHAVMRKWLLLNDPEDTSSGSKGYMKVSMFVLGTGDE 328 ppvekKdseeDkDDIEsNLLLPaGV<-* pp+e++d+++D+DD+EsNLLLPaG+ KIAA1207 329 PPPERRDRDNDSDDVESNLLLPAGI 353 PF00168.20.ls: domain 3 of 6, from 360 to 458: score 80.7, E = 4.3e-21 *->LrVtvieAknLppkDk...............kngksDPYVkvylggd +++++A++ p +D+ +++ ++ +++ +k+ ++DP+V+v++ g KIAA1207 360 FLLKIYRAEDIPQMDDafsqtvkeifggnadKKNLVDPFVEVSFAG- 405 kkdqkkkTkvikktlNPvWNEtFtFevpppdlqetLeieVyDydrfgrdd +k T +i+k+ NP+WN++ +++ +p++ e++++++yD+dr++++d KIAA1207 406 ---KKVCTNIIEKNANPEWNQVVNLQIKFPSVCEKIKLTIYDWDRLTKND 452 flGevs<-* ++G++ KIAA1207 453 VVGTTY 458 PF00168.20.fs: domain 3 of 8, from 360 to 458: score 78.7, E = 7.6e-23 *->LrVtvieAknLppkDk...............kngksDPYVkvylggd +++++A++ p +D+ +++ ++ +++ +k+ ++DP+V+v++ g KIAA1207 360 FLLKIYRAEDIPQMDDafsqtvkeifggnadKKNLVDPFVEVSFAG- 405 kkdqkkkTkvikktlNPvWNEtFtFevpppdlqetLeieVyDydrfgrdd +k T +i+k+ NP+WN++ +++ +p++ e++++++yD+dr++++d KIAA1207 406 ---KKVCTNIIEKNANPEWNQVVNLQIKFPSVCEKIKLTIYDWDRLTKND 452 flGevs<-* ++G++ KIAA1207 453 VVGTTY 458 PF08165.2.fs: domain 1 of 1, from 676 to 741: score 128.1, E = 2.3e-35 *->lalkakdsaasvgelwLkLideliediaSktLpdiegkpsvTaLDrq +++++k++a++++elwLkLide+ied +++tLp +egk++vT+LD+q KIAA1207 676 SGIQGKIPANQLAELWLKLIDEVIED-TRYTLPLTEGKANVTVLDTQ 721 IlkLRkrkLsqIrEaAlrlk<-* I+kLR+r+LsqI+EaA+r++ KIAA1207 722 IRKLRSRSLSQIHEAAVRMR 741 PF08165.2.ls: domain 1 of 1, from 676 to 741: score 130.1, E = 5.8e-36 *->lalkakdsaasvgelwLkLideliediaSktLpdiegkpsvTaLDrq +++++k++a++++elwLkLide+ied +++tLp +egk++vT+LD+q KIAA1207 676 SGIQGKIPANQLAELWLKLIDEVIED-TRYTLPLTEGKANVTVLDTQ 721 IlkLRkrkLsqIrEaAlrlk<-* I+kLR+r+LsqI+EaA+r++ KIAA1207 722 IRKLRSRSLSQIHEAAVRMR 741 PF08150.2.ls: domain 1 of 1, from 768 to 843: score 203.4, E = 4.9e-58 *->PQnSlPDifIWMlsgeKRvAYaRiPAhdvLyStvgeeetGkdCGKvQ PQnS+PDi+IWM++geKR+AYaRiPAh+vLySt+ge+++Gk+CGK+Q KIAA1207 768 PQNSMPDIIIWMIRGEKRLAYARIPAHQVLYSTSGENASGKYCGKTQ 814 TvfLklPgekgnGpAGWkVpaklrlyLWLGLs<-* T+fLk+P+ek nGp kVp++lr+++WLGLs KIAA1207 815 TIFLKYPQEKNNGP---KVPVELRVNIWLGLS 843 PF08150.2.fs: domain 1 of 1, from 768 to 843: score 201.4, E = 2.1e-58 *->PQnSlPDifIWMlsgeKRvAYaRiPAhdvLyStvgeeetGkdCGKvQ PQnS+PDi+IWM++geKR+AYaRiPAh+vLySt+ge+++Gk+CGK+Q KIAA1207 768 PQNSMPDIIIWMIRGEKRLAYARIPAHQVLYSTSGENASGKYCGKTQ 814 TvfLklPgekgnGpAGWkVpaklrlyLWLGLs<-* T+fLk+P+ek nGp kVp++lr+++WLGLs KIAA1207 815 TIFLKYPQEKNNGP---KVPVELRVNIWLGLS 843 PF00168.20.fs: domain 4 of 8, from 1141 to 1231: score 70.5, E = 2.1e-20 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl Lr++v++A+nL + D k + sDPY+ ++++ k T++i++tl KIAA1207 1141 LRCYVYQARNLLALD-KDSFSDPYAHICFLH----RSKTTEIIHSTL 1182 NPvWNEtFtFe.v.....pppdlqe..tLeieVyDydrfgrddflGevs< NP+W++t F++v+ ++p lq+++++ e++D+d +g+d+flG+ + KIAA1207 1183 NPTWDQTIIFDeVeiygePQTVLQNppKVIMELFDNDQVGKDEFLGRSI 1231 -* KIAA1207 - - PF00168.20.ls: domain 4 of 6, from 1141 to 1231: score 72.4, E = 1.3e-18 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl Lr++v++A+nL + D k + sDPY+ ++++ k T++i++tl KIAA1207 1141 LRCYVYQARNLLALD-KDSFSDPYAHICFLH----RSKTTEIIHSTL 1182 NPvWNEtFtFe.v.....pppdlqe..tLeieVyDydrfgrddflGevs< NP+W++t F++v+ ++p lq+++++ e++D+d +g+d+flG+ + KIAA1207 1183 NPTWDQTIIFDeVeiygePQTVLQNppKVIMELFDNDQVGKDEFLGRSI 1231 -* KIAA1207 - - PF00168.20.fs: domain 5 of 8, from 1303 to 1393: score 18.0, E = 8.1e-05 *->LrVtvieAknLppkDk..kngksDPYVkvylggdkkdqkkkTkvikk L+ i A +L+++ + ++ + ++P +v++gg + + vik+ KIAA1207 1303 LTAIEILAWGLRNMKNfqMASITSPSLVVECGG----ERVESVVIKN 1345 t.lNPvWN....EtFtFevpppdlqe.tLeieVyDydrfgrddflGevs< + P + ++ + +F p ++l +++L+i+V D++ fgr ++G+++ KIAA1207 1346 LkKTPNFPssvlFMKVFL-PKEELYMpPLVIKVIDHRQFGRKPVVGQCT 1393 -* KIAA1207 - - PF00168.20.ls: domain 5 of 6, from 1303 to 1393: score 20.0, E = 0.0038 *->LrVtvieAknLppkDk..kngksDPYVkvylggdkkdqkkkTkvikk L+ i A +L+++ + ++ + ++P +v++gg + + vik+ KIAA1207 1303 LTAIEILAWGLRNMKNfqMASITSPSLVVECGG----ERVESVVIKN 1345 t.lNPvWN....EtFtFevpppdlqe.tLeieVyDydrfgrddflGevs< + P + ++ + +F p ++l +++L+i+V D++ fgr ++G+++ KIAA1207 1346 LkKTPNFPssvlFMKVFL-PKEELYMpPLVIKVIDHRQFGRKPVVGQCT 1393 -* KIAA1207 - - PF00168.20.ls: domain 6 of 6, from 1555 to 1638: score 77.8, E = 3.1e-20 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +r++++++ L p D ng++DPY k++lg+ k+ + + i++tl KIAA1207 1555 VRIYIVRGLELQPQD-NNGLCDPYIKITLGK-KV-IEDRDHYIPNTL 1598 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* NPv+ +++++ +p+ ++ L+i+VyDyd+f+rd+ +Ge++ KIAA1207 1599 NPVFGRMYELSCYLPQEKD-LKISVYDYDTFTRDEKVGETI 1638 PF00168.20.fs: domain 6 of 8, from 1555 to 1638: score 75.9, E = 5.2e-22 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +r++++++ L p D ng++DPY k++lg+ k+ + + i++tl KIAA1207 1555 VRIYIVRGLELQPQD-NNGLCDPYIKITLGK-KV-IEDRDHYIPNTL 1598 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* NPv+ +++++ +p+ ++ L+i+VyDyd+f+rd+ +Ge++ KIAA1207 1599 NPVFGRMYELSCYLPQEKD-LKISVYDYDTFTRDEKVGETI 1638 //