hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20383526/chunk_1/iprscan-20080501-20383526.nocrc
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Query sequence: KIAA1218
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08313.2.ls SCA7                                           135.6    1.3e-37   1
PF08313.2.fs SCA7                                           133.6    4.9e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08313.2.fs   1/1     273   350 ..     1    81 []   133.6  4.9e-37
PF08313.2.ls   1/1     273   350 ..     1    81 []   135.6  1.3e-37

Alignments of top-scoring domains:
PF08313.2.fs: domain 1 of 1, from 273 to 350: score 133.6, E = 4.9e-37
                   *->tkkkkkekkknnrkelkkpkekkevDvdkQCGVilPeGkkvCaRSLT
                      +k +  +k++n      ++++++e+D++k+CGV +Pe+kk+C+RSLT
    KIAA1218   273    KKHQNGTKNSN---KPYRRLSEREFDPNKHCGVLDPETKKPCTRSLT 316  

                   CKsHSmgaKRAVqGRskpyDvLLaeyqkknqaKe<-*
                   CK+HS++ +RAV+GR+k +D LLae+++k+++Ke   
    KIAA1218   317 CKTHSLSHRRAVPGRKKQFDLLLAEHKAKSREKE    350  

PF08313.2.ls: domain 1 of 1, from 273 to 350: score 135.6, E = 1.3e-37
                   *->tkkkkkekkknnrkelkkpkekkevDvdkQCGVilPeGkkvCaRSLT
                      +k +  +k++n      ++++++e+D++k+CGV +Pe+kk+C+RSLT
    KIAA1218   273    KKHQNGTKNSN---KPYRRLSEREFDPNKHCGVLDPETKKPCTRSLT 316  

                   CKsHSmgaKRAVqGRskpyDvLLaeyqkknqaKe<-*
                   CK+HS++ +RAV+GR+k +D LLae+++k+++Ke   
    KIAA1218   317 CKTHSLSHRRAVPGRKKQFDLLLAEHKAKSREKE    350  

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