hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21232797/chunk_1/iprscan-20080501-21232797.nocrc
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Query sequence: KIAA1243
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02037.17.fs SAP domain                                      53.4    8.8e-14   1
PF02037.17.ls SAP domain                                      55.4    1.8e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02037.17.fs   1/1     129   163 ..     1    35 []    53.4  8.8e-14
PF02037.17.ls   1/1     129   163 ..     1    35 []    55.4  1.8e-13

Alignments of top-scoring domains:
PF02037.17.fs: domain 1 of 1, from 129 to 163: score 53.4, E = 8.8e-14
                   *->lskLkVseLKeeLkkrGLstsGkKaeLveRLleal<-*
                      l+ LkVseLK eLk rGL++sG+K++L+eRL+ +    
    KIAA1243   129    LDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQ    163  

PF02037.17.ls: domain 1 of 1, from 129 to 163: score 55.4, E = 1.8e-13
                   *->lskLkVseLKeeLkkrGLstsGkKaeLveRLleal<-*
                      l+ LkVseLK eLk rGL++sG+K++L+eRL+ +    
    KIAA1243   129    LDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQ    163  

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