hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21383436/chunk_1/iprscan-20080501-21383436.nocrc
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Query sequence: KIAA1252
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00282.9.ls  Pyridoxal-dependent decarboxylase conse   -75.2    2.1e-09   1
PF00282.9.fs  Pyridoxal-dependent decarboxylase conse    21.7    3.3e-06   2
PF00266.9.ls  Aminotransferase class-V                 -146.3    4.8e-05   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00282.9.ls    1/1     155   468 ..     1   399 []   -75.2  2.1e-09
PF00266.9.ls    1/1     167   512 ..     1   399 []  -146.3  4.8e-05

Alignments of top-scoring domains:
PF00282.9.ls: domain 1 of 1, from 155 to 468: score -75.2, E = 2.1e-09
                   *->PgylrpllpeaaPikpeslldileDieknimpGvthWhsPnfhayfp
                       g     +  ++   +e+l  +l+      ++G   W+ P     fp
    KIAA1252   155    -GR----ASGTVYSGEEKLTELLVK-----AYGDFAWSNPLHPDIFP 191  

                   agnSypalLGdmLsdaINcngFtwessPAcTELEvvvmdwlgkmlglPke
                                       g  +++               ++++ +  +
    KIAA1252   192 --------------------GLRKIE---------------AEIVRIACS 206  

                   .flgssgsqGGGvlqgggSESnLlallAARtkwlrrmkargkpldsseIl
                    f+g ++    G++++gg+ES+L a  A R++++    ++g        +
    KIAA1252   207 lFNGGPD--SCGCVTSGGTESILMACKAYRDLAF----EKG--------I 242  

                   gKLVlYtSdqaHsSvmeKaakiagVktdnlrlipsdedngkmrgddLeka
                    ++ +++   aH ++  Kaa ++g k   +  +p+++   + ++ + ++a
    KIAA1252   243 KTPEIVAPQSAHAAF-NKAASYFGMK---IVRVPLTK-MMEVDVRAMRRA 287  

                   IeedkerGLiPffVcAT..lGTTvsgaFDnlqelgdicaklgietGydlW
                   I +  +       Vc T+++     g  D+++e++++++k      y ++
    KIAA1252   288 ISRNTAM-----LVCSTpqF---PHGVIDPVPEVAKLAVK------YKIP 323  

                   lHVDAAyaGsAfIcPefRh.....elpwlfGiEraDSisfnPHKwmlvll
                   lHVDA ++G  f+  + +  + + e p++f++  + Sis+  HK++ ++ 
    KIAA1252   324 LHVDACLGG--FLIVFMEKagyplEHPFDFRVKGVTSISADTHKYGYAPK 371  

                   dCsalwvKdksaLqdalsvnpeYLkhndkqsdvavDfktwqIplSRgnrf
                   + s ++  dk      + v+ +  +        ++  +t+++  SR  + 
    KIAA1252   372 GSSLVLYSDKKYRNYQFFVDTDWQG-------GIYASPTIAG--SR-PGG 411  

                   riLKlWfvlRsyGveglqnhIrehvelAkyfedlvrkdgrdFeivadper
                    ++  W++l  +G  g+ +     +  A  + +++++ +   + v+ + +
    KIAA1252   412 ISAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKG--IFVF-GNP 458  

                   nlglVcFrlK<-*
                    l+ ++   +   
    KIAA1252   459 QLSVIALGSR    468  

PF00266.9.ls: domain 1 of 1, from 167 to 512: score -146.3, E = 4.8e-05
                   *->iYLDsAATtqkPqaVldAlqeyYtdyngNvHRVmgvHtlgaeataay
                               ++ +  ++A+ ++     +N+    +    g + ++a 
    KIAA1252   167    ---------KLTELLVKAYGDF---AWSNPLH--PDIFPGLRKIEA- 198  

                   EeaRekVAefinApsdeeIiFTsGtTegaiNLvAnslgrsrlkpGDeI..
                   E +R     f + p+ +    TsG+Te +i ++  ++++  +++G + ++
    KIAA1252   199 EIVRIACSLFNGGPD-SCGCVTSGGTE-SILMACKAYRDLAFEKGIKTpe 246  

                   ivtemEHhANlvPWqelakrtGatvrvipvdddGlldvldeleklitprT
                   iv     hA++     +a   G +++++p++++ + d + + + +i+ +T
    KIAA1252   247 IVAPQSAHAAF---NKAASYFGMKIVRVPLTKMMEVD-VRAMRRAISRNT 292  

                   klVaithvSNvtGtvnPveeigklaheyPGAlvvVDaAQa...vgHi...
                   + +  +     +G+++Pv+e++kla +y ++ ++VDa+ ++  ++ +++ 
    KIAA1252   293 AMLVCSTPQFPHGVIDPVPEVAKLAVKY-KIPLHVDACLGgflIVFMeka 341  

                   ......piDvqalgvDFlaFSG..HKglyGPtGiGVLYgkrelleklpPl
                   + + ++p D +  gv   ++S+++HK  y+P+G   +  +++   ++   
    KIAA1252   342 gyplehPFDFRVKGV--TSISAdtHKYGYAPKGSSLVLYSDKKYRNY--- 386  

                   lgGGgMietvslqgttvffaeaPwkFEhAGTPniagiiGLgaAldylkee
                         + + + qg    +a +      AG+ +     ++ aAl +   e
    KIAA1252   387 ----QFFVDTDWQGGI--YASPTI----AGSRPGGISAACWAALMHF-GE 425  

                   igleaieahekeLaeylyerLlaipgirlryGvpavaerrasiisFnfPk
                    g  ++ + + + a +l  +L++i gi + +G     +++ s+i+    +
    KIAA1252   426 NGYVEATKQIIKTARFLKSELENIKGIFV-FG-----NPQLSVIALGS-R 468  

                   gvhphDvatlLderfGIAVRslkGhhCASGsLqPlmkrlgvekpytaAhg
                   + + + +  l+  + G  + +                 l+ +        
    KIAA1252   469 DFDIYRLSNLMTAK-GWNLNQ-----------------LQFP-------P 493  

                   tlRaS.lyiYNTeeevdrL<-*
                   ++ +    ++  +    ++   
    KIAA1252   494 SIHFCiTLLHARKRVAIQF    512  

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