HUGE

Gene/Protein Characteristic Table for KIAA1254

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00206
Accession No. :	AB033080
Description :	cell cycle progression 1 isoform 1.
HUGO Gene Name :	cell cycle progression 1 (CCPG1)
Clone Name :	hh14357s1 [Vector Info]
Flexi ORF Clone :	pF1KA1254
Source :	Human adult brain
Note :	We replaced hh14357, former representative clones for KIAA1254 with hh14357s1. (2002/5/10)

Features of the cloned DNA sequence	Description

Length: 6213 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 3855 bp

Genome contig ID gi51511731r_53335134
PolyA signal sequence
(AATAAA,-20)
+----*----+----*----+----*----+----
TATCGTGGAAGAAACAATAAAACTACACCATGAGG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAACTAAAGGTCTTTATTTAAAATCTGGCATTGTATTAACATGTAATTT

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 15 r 53435134 53487785 8 99.1 Perfect prediction

Features of the protein sequence	Description

Length: 758 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAG11298	100.0	cell cycle prog...	synthetic construct
Q9ULG6	99.9	Cell cycle prog...	Homo sapiens
XP_523082	99.2	cell cycle prog...	Pan troglodytes
BAF85484	99.9	unnamed protein...	Homo sapiens
XP_001171139	99.2	hypothetical pr...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 212 FSSGLNKCVILALVIAISMGFGH 234 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	212	FSSGLNKCVILALVIAISMGFGH	234	PRIMARY	23

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: AATCTGAAGACCGGCTAGTTG

Primer_r
: CTGTTGACGCTTCTGAATCTG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 15

Experimental conditions

Panel name	: unigene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	3855 bp
Genome contig ID	gi51511731r_53335134
PolyA signal sequence (AATAAA,-20)	+--------+--------+----*----+---- TATCGTGGAAGAAACAATAAAACTACACCATGAGG
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAAACTAAAGGTCTTTATTTAAAATCTGGCATTGTATTAACATGTAATTT

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	15	r	53435134	53487785	8	99.1	Perfect prediction

Primer_f	: AATCTGAAGACCGGCTAGTTG
Primer_r	: CTGTTGACGCTTCTGAATCTG
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1254

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information