hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21483599/chunk_1/iprscan-20080501-21483599.nocrc
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Query sequence: KIAA1258
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01979.10.ls Amidohydrolase family                      234.2    2.5e-67   1
PF01979.10.fs Amidohydrolase family                      232.5    8.5e-67   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01979.10.fs   1/1      98   426 ..     1   465 []   232.5  8.5e-67
PF01979.10.ls   1/1      98   426 ..     1   465 []   234.2  2.5e-67

Alignments of top-scoring domains:
PF01979.10.fs: domain 1 of 1, from 98 to 426: score 232.5, E = 8.5e-67
                   *->ivlPGlIPDaHvHleqsllrGgsaddlpLldWLnkliwpleaelvse
                      + +PGl+ D+H+H+ q+ +  gs +dlpLl+WL k+++p+e ++++ 
    KIAA1258    98    FFMPGLV-DTHIHASQYSFA-GSSIDLPLLEWLTKYTFPAEHRFQNI 142  

                   edsyeaillgakemlrsGtTtvldtphtrantdgkkgvplmleeaktplq
                   +++ e++ + ++++l+ GtTt++++   +  +                  
    KIAA1258   143 DFAEEVYTRVVRRTLKNGTTTACYF---ATIHT----------------- 172  

                   fyfllpscvparkeideglaaapkleanvgllgkgevggraelgevvidr
                                  d  l  a++         ++  g+ra +g+v++d 
    KIAA1258   173 ---------------DSSLLLADI---------TDKFGQRAFVGKVCMDL 198  

                   aageavfafpDGMvagviSdevrkavrerlkegadfikkiadggkgakai
                   +     ++f          +e + +++e++ke+++f++ +   +      
    KIAA1258   199 N-----DTF----------PEYKETTEESIKETERFVSEMLQKNYS---- 229  

                   dgvlpalaphdpptvsheelkaevelaeeteeaeklgllvhiHaaeasge
                    +v p+++p++  ++s++++ +  ++a+ +      +l++  H+ e++ e
    KIAA1258   230 -RVKPIVTPRFSLSCSETLMGELGNIAKTR------DLHIQSHISENRDE 272  

                   hLieavehlytkgmspverllkeagvveianvlpsstdptgll.knaikg
                     +eav++ly                       ps  ++t  ++kn++  
    KIAA1258   273 --VEAVKNLY-----------------------PSYKNYTSVYdKNNLLT 297  

                   gvdllaHclhLdkeidedveiQellkernqLieaagsgvahcplsnesvl
                    +++ aH+ +L+   +e  e+  +++er       g+++ahcp sn s  
    KIAA1258   298 NKTVMAHGCYLS---AE--EL-NVFHER-------GASIAHCPNSNLS-- 332  

                   hdggkisllegdaqgmgelgsggarlarlaekagvnrGpVglGTDtdaGa
                                     l+sg++++ ++++   v+   +glGTD+ +G 
    KIAA1258   333 ------------------LSSGFLNVLEVLKH-EVK---IGLGTDVAGGY 360  

                   asnnsldlleemkv..alllggpkfygldpnvlspkealrmaTinpAkal
                   + +++ +++++ +v++ ll++  k+++     l++ke++r aT++++ al
    KIAA1258   361 SYSMLDAIRRAVMVsnILLIN--KVNEKS---LTLKEVFRLATLGGSQAL 405  

                   GlddrvGsievGkdADlvvvd<-*
                   Gld ++G +evGk+ D ++++   
    KIAA1258   406 GLDGEIGNFEVGKEFDAILIN    426  

PF01979.10.ls: domain 1 of 1, from 98 to 426: score 234.2, E = 2.5e-67
                   *->ivlPGlIPDaHvHleqsllrGgsaddlpLldWLnkliwpleaelvse
                      + +PGl+ D+H+H+ q+ +  gs +dlpLl+WL k+++p+e ++++ 
    KIAA1258    98    FFMPGLV-DTHIHASQYSFA-GSSIDLPLLEWLTKYTFPAEHRFQNI 142  

                   edsyeaillgakemlrsGtTtvldtphtrantdgkkgvplmleeaktplq
                   +++ e++ + ++++l+ GtTt++++   +  +                  
    KIAA1258   143 DFAEEVYTRVVRRTLKNGTTTACYF---ATIHT----------------- 172  

                   fyfllpscvparkeideglaaapkleanvgllgkgevggraelgevvidr
                                  d  l  a++         ++  g+ra +g+v++d 
    KIAA1258   173 ---------------DSSLLLADI---------TDKFGQRAFVGKVCMDL 198  

                   aageavfafpDGMvagviSdevrkavrerlkegadfikkiadggkgakai
                   +     ++f          +e + +++e++ke+++f++ +   +      
    KIAA1258   199 N-----DTF----------PEYKETTEESIKETERFVSEMLQKNYS---- 229  

                   dgvlpalaphdpptvsheelkaevelaeeteeaeklgllvhiHaaeasge
                    +v p+++p++  ++s++++ +  ++a+ +      +l++  H+ e++ e
    KIAA1258   230 -RVKPIVTPRFSLSCSETLMGELGNIAKTR------DLHIQSHISENRDE 272  

                   hLieavehlytkgmspverllkeagvveianvlpsstdptgll.knaikg
                     +eav++ly                       ps  ++t  ++kn++  
    KIAA1258   273 --VEAVKNLY-----------------------PSYKNYTSVYdKNNLLT 297  

                   gvdllaHclhLdkeidedveiQellkernqLieaagsgvahcplsnesvl
                    +++ aH+ +L+   +e  e+  +++er       g+++ahcp sn s  
    KIAA1258   298 NKTVMAHGCYLS---AE--EL-NVFHER-------GASIAHCPNSNLS-- 332  

                   hdggkisllegdaqgmgelgsggarlarlaekagvnrGpVglGTDtdaGa
                                     l+sg++++ ++++   v+   +glGTD+ +G 
    KIAA1258   333 ------------------LSSGFLNVLEVLKH-EVK---IGLGTDVAGGY 360  

                   asnnsldlleemkv..alllggpkfygldpnvlspkealrmaTinpAkal
                   + +++ +++++ +v++ ll++  k+++     l++ke++r aT++++ al
    KIAA1258   361 SYSMLDAIRRAVMVsnILLIN--KVNEKS---LTLKEVFRLATLGGSQAL 405  

                   GlddrvGsievGkdADlvvvd<-*
                   Gld ++G +evGk+ D ++++   
    KIAA1258   406 GLDGEIGNFEVGKEFDAILIN    426  

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